RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 DDIT3P35638 169 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 THPOP40225 353 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 PRPHP41219 470 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 XKR3Q5GH77 459 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 TMEM240Q5SV17 173 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 RPAINQ86UA6 219 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 CATSPER3Q86XQ3 398 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 TPH2Q8IWU9 490 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 C4orf19Q8IY42 314 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 KIAA0319LQ8IZA0 1049 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 LRRC15Q8TF66 581 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.311e-9■■□□□ 11.6
TRIT1-215ENST00000541099 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
TRIT1-215ENST00000541099 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
TRIT1-215ENST00000541099 IGKV6-21A0A0C4DH24 114 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 LYPLA2O95372 231 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 F13A1P00488 732 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
TRIT1-215ENST00000541099 GNAT1P11488 350 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 FPGSQ05932 587 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 BFSP2Q13515 415 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 SHHQ15465 462 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 FAM26DQ5JW98 314 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 LRRC8DQ7L1W4 858 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 LRRC71Q8N4P6 559 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
TRIT1-215ENST00000541099 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
TRIT1-215ENST00000541099 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 IL23AQ9NPF7 189 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 SEPT9Q9UHD8 586 aaPredicted RBP13.11□□□□□ -0.31
TRIT1-215ENST00000541099 SCN5AQ14524 2016 aa13.11□□□□□ -0.31
TRIT1-215ENST00000541099 SMIM35A0A1B0GVV1 85 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 LAD1O00515 517 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 CXCL10P02778 98 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 CLCN3P51790 818 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 TMEM62Q0P6H9 643 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 TAF2Q6P1X5 1199 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 KCNK18Q7Z418 384 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 DEFB128Q7Z7B8 93 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 TMEM199Q8N511 208 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 POLR3CQ9BUI4 534 aaPredicted RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 ZSWIM4Q9H7M6 989 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 NRBP2Q9NSY0 501 aa13.1□□□□□ -0.31
TRIT1-215ENST00000541099 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 FBXO2Q9UK22 296 aaPredicted RBP13.1□□□□□ -0.31
TRIT1-215ENST00000541099 MYH9P35579 1960 aaKnown RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 VWA3AA6NCI4 1184 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 RSPH10B2B2RC85 870 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 RSPH10BP0C881 870 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 RPA1P27694 616 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.316e-8■□□□□ 9.1
TRIT1-215ENST00000541099 PDIA5Q14554 519 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 DTHD1Q6ZMT9 781 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 USP49Q70CQ1 688 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 NEK9Q8TD19 979 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 PPP1R16BQ96T49 567 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
TRIT1-215ENST00000541099 TUFT1Q9NNX1 390 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 CYP26B1Q9NR63 512 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 CDY2AQ9Y6F7 541 aa13.09□□□□□ -0.31
TRIT1-215ENST00000541099 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.31
TRIT1-215ENST00000541099 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
TRIT1-215ENST00000541099 CAND2O75155 1236 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 GPR32O75388 356 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 MAFO75444 373 aaPredicted RBP13.08□□□□□ -0.32
TRIT1-215ENST00000541099 VTNP04004 478 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 RARRES1P49788 294 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
TRIT1-215ENST00000541099 GRB10Q13322 594 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 LPIN1Q14693 890 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
TRIT1-215ENST00000541099 EFCAB12Q6NXP0 572 aa13.08□□□□□ -0.32
TRIT1-215ENST00000541099 CEP170P1Q96L14 293 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms