RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 FHOD1Q9Y613 1164 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 ALAS1P13196 640 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 NMT1P30419 496 aaKnown RBP15.14■□□□□ 0.01
RTN3-210ENST00000540798 POLR2FP61218 127 aaKnown RBP15.14■□□□□ 0.01
RTN3-210ENST00000540798 SFMBT2Q5VUG0 894 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 DCAF15Q66K64 600 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 MYCT1Q8N699 235 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 TMEM174Q8WUU8 243 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 C12orf42Q96LP6 360 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 PARD6BQ9BYG5 372 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
RTN3-210ENST00000540798 FBXL5Q9UKA1 691 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 FLOT1O75955 427 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 TFRCP02786 760 aaKnown RBP15.13■□□□□ 0.01
RTN3-210ENST00000540798 PGM5Q15124 567 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 DAW1Q8N136 415 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 SLC35C1Q96A29 364 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 MKNK1Q9BUB5 465 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 DMAC2Q9NW81 257 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 PUF60Q9UHX1 559 aaKnown RBP15.13■□□□□ 0.01
RTN3-210ENST00000540798 RAB21Q9UL25 225 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 PAPPA2Q9BXP8 1791 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 GTPBP10A4D1E9 387 aaKnown RBP15.13■□□□□ 0.01
RTN3-210ENST00000540798 VWA5AO00534 786 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 ATP8B1O43520 1251 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 USO1O60763 962 aaKnown RBP15.13■□□□□ 0.01
RTN3-210ENST00000540798 P4HBP07237 508 aaKnown RBP15.13■□□□□ 0.01
RTN3-210ENST00000540798 BACE1P56817 501 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 RPS6P62753 249 aaKnown RBP15.13■□□□□ 0.01
RTN3-210ENST00000540798 BANK1Q8NDB2 785 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 POLD4Q9HCU8 107 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 NLRC4Q9NPP4 1024 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 ADAMTS5Q9UNA0 930 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 ZNF541Q9H0D2 1346 aa15.13■□□□□ 0.01
RTN3-210ENST00000540798 XRCC5P13010 732 aaKnown RBP15.12■□□□□ 0.01
RTN3-210ENST00000540798 CASP4P49662 377 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 APBA1Q02410 837 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 SLC9C1Q4G0N8 1177 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 CPXCR1Q8N123 301 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 TAAR1Q96RJ0 339 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 CRACR2AQ9BSW2 395 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 BCS1LQ9Y276 419 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 SAR1BQ9Y6B6 198 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 SSC5DA1L4H1 1573 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 ZBED4O75132 1171 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 MAPTP10636 758 aaKnown RBP15.12■□□□□ 0.01
RTN3-210ENST00000540798 EPB41P11171 864 aaKnown RBP15.12■□□□□ 0.01
RTN3-210ENST00000540798 PON1P27169 355 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 ZC2HC1CQ53FD0 456 aaPredicted RBP15.12■□□□□ 0.01
RTN3-210ENST00000540798 CC2D1AQ6P1N0 951 aaPredicted RBP15.12■□□□□ 0.01
RTN3-210ENST00000540798 TRIM58Q8NG06 486 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 DEF6Q9H4E7 631 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 ZSWIM4Q9H7M6 989 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 SIX2Q9NPC8 291 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 TBC1D22BQ9NU19 505 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 HDAC6Q9UBN7 1215 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 CTAGE15A4D2H0 777 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 ENC1O14682 589 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 AKR1B10O60218 316 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 CTAGE8P0CG41 777 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 PTPRAP18433 802 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 BMS1Q14692 1282 aaKnown RBP15.12■□□□□ 0.01
RTN3-210ENST00000540798 KLHDC7AQ5VTJ3 777 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 TMCO3Q6UWJ1 677 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 CTAGE6Q86UF2 777 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 CTAGE4Q8IX94 777 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 PXMP2Q9NR77 195 aa15.12■□□□□ 0.01
RTN3-210ENST00000540798 LCTP09848 1927 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 GFPT1Q06210 699 aaPredicted RBP15.11■□□□□ 0.01
RTN3-210ENST00000540798 SPP2Q13103 211 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 MTMR1Q13613 665 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 APOBEC3FQ8IUX4 373 aaKnown RBP15.11■□□□□ 0.01
RTN3-210ENST00000540798 SLC9A9Q8IVB4 645 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 PDCD2LQ9BRP1 358 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 ZHX2Q9Y6X8 837 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 ARID2Q68CP9 1835 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 ARHGEF35A5YM69 484 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 HIP1RO75146 1068 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 OAZ1P54368 228 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 BRD3Q15059 726 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 STXBP4Q6ZWJ1 553 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 FAM178BQ8IXR5 827 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 TXLNBQ8N3L3 684 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 ZNF280CQ8ND82 737 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 HNRNPLLQ8WVV9 542 aaKnown RBP15.11■□□□□ 0.01
RTN3-210ENST00000540798 WNK4Q96J92 1243 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 CAPN6Q9Y6Q1 641 aa15.11■□□□□ 0.01
RTN3-210ENST00000540798 CCDC151A5D8V7 595 aa15.1■□□□□ 0.01
RTN3-210ENST00000540798 CLIC2O15247 247 aa15.1■□□□□ 0.01
RTN3-210ENST00000540798 PNMA6AP0CW24 399 aaPredicted RBP15.1■□□□□ 0.01
RTN3-210ENST00000540798 PRLRP16471 622 aa15.1■□□□□ 0.01
RTN3-210ENST00000540798 SLC9A1P19634 815 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms