RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 DPP9Q86TI2 863 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 FBXO16Q8IX29 292 aaPredicted RBP15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 TRIM5Q9C035 493 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 RNF208Q9H0X6 261 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 VTA1Q9NP79 307 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 SLC39A2Q9NP94 309 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 FANCLQ9NW38 375 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 SLC5A4Q9NY91 659 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 GABBR1Q9UBS5 961 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 PCDHA2Q9Y5H9 948 aa15.8■□□□□ 0.12
CYB561A3-216ENST00000540755 IGKV6D-21A0A0A0MT36 114 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 BICDL2A1A5D9 508 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 TBCAO75347 108 aaKnown RBP15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 GGPS1O95749 300 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 GAP43P17677 238 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 CCNE1P24864 410 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 GUCY2CP25092 1073 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 RARRES1P49788 294 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 ZNF75DP51815 510 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 TTLL4Q14679 1199 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 HERC4Q5GLZ8 1057 aaPredicted RBP15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 MORN1Q5T089 497 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 MSL3Q8N5Y2 521 aaKnown RBP15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 PXYLP1Q8TE99 480 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 HPS3Q969F9 1004 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 MRFAP1L1Q96HT8 127 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 ODF2LQ9ULJ1 636 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 MAPK8IP1Q9UQF2 711 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 COL4A3BPQ9Y5P4 624 aa15.79■□□□□ 0.12
CYB561A3-216ENST00000540755 RBM47A0AV96 593 aaKnown RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 H0YGN5 161 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 ARIH2O95376 493 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 RAD51AP2Q09MP3 1159 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 LY6KQ17RY6 165 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 SWSAP1Q6NVH7 229 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 FOXR2Q6PJQ5 311 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 PADI6Q6TGC4 694 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 CCDC60Q8IWA6 550 aaPredicted RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 U2AF1L4Q8WU68 220 aaKnown RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 SCFD2Q8WU76 684 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 P2RX5Q93086 422 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 MAML3Q96JK9 1138 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 TIPINQ9BVW5 301 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 TELO2Q9Y4R8 837 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 STBD1O95210 358 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 KIF20AO95235 890 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 CDC25BP30305 580 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 ZNF131P52739 623 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 SP4Q02446 784 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 MAP2K5Q13163 448 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 CELF3Q5SZQ8 465 aaKnown RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 CDKAL1Q5VV42 579 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 CENPPQ6IPU0 288 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 OTUD6AQ7L8S5 288 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 KATNBL1Q9H079 304 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 MLXIPQ9HAP2 919 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 ZNF302Q9NR11 478 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 OLFML3Q9NRN5 406 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 SEL1LQ9UBV2 794 aa15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 MAFBQ9Y5Q3 323 aaPredicted RBP15.78■□□□□ 0.12
CYB561A3-216ENST00000540755 GSTTP1A0A1W2PQM5 241 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 RSPH10B2B2RC85 870 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 ZNF862O60290 1169 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 SORBS3O60504 671 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 FAM13AO94988 1023 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 HOXC6P09630 235 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 RSPH10BP0C881 870 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 ATP1A3P13637 1013 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 FANCCQ00597 558 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 TPD52L1Q16890 204 aaPredicted RBP15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 TTI2Q6NXR4 508 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 ANO5Q75V66 913 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 SFR1Q86XK3 245 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 MYOCDQ8IZQ8 938 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 NPLOC4Q8TAT6 608 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 AFAP1L1Q8TED9 768 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 SEPT1Q8WYJ6 367 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 CCDC43Q96MW1 224 aaKnown RBP15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 TINF2Q9BSI4 451 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 ZHX3Q9H4I2 956 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 PARVGQ9HBI0 331 aa15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 PAK6Q9NQU5 681 aaPredicted RBP15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 SAMSN1Q9NSI8 373 aaKnown RBP15.77■□□□□ 0.11
CYB561A3-216ENST00000540755 TRIM49BA6NDI0 452 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 BACH1O14867 736 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 SNAI1O95863 264 aaPredicted RBP15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 TXNP10599 105 aaKnown RBP15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 PMS1P54277 932 aaKnown RBP15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 PRKCEQ02156 737 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 XKR3Q5GH77 459 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 NOC3LQ8WTT2 800 aaKnown RBP15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 USP6NLQ92738 828 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 PDGFCQ9NRA1 345 aa15.76■□□□□ 0.11
CYB561A3-216ENST00000540755 PCDH10Q9P2E7 1040 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms