RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 LIN7AO14910 233 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 AREL1O15033 823 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 POLR2DO15514 142 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 TRPA1O75762 1119 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 KRT14P02533 472 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 HSPA1LP34931 641 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 MSH2P43246 934 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 LRRC31Q6UY01 552 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 FAM47EQ6ZV65 393 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 NUDCD3Q8IVD9 361 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 VSTM4Q8IW00 320 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 GSPT2Q8IYD1 628 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 SLC35F6Q8N357 371 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 PRPF31Q8WWY3 499 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 PPCSQ9HAB8 311 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 SLC40A1Q9NP59 571 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 MRPL40Q9NQ50 206 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 MAN1B1Q9UKM7 699 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 RABL2BQ9UNT1 228 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 ATXN2Q99700 1313 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 SMAPO00193 183 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 N4BP1O75113 896 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 RPS6KA5O75582 802 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 KRT10P13645 584 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 KRT4P19013 534 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 NR1D1P20393 614 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 KLRK1P26718 216 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 GUCY1A2P33402 732 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 ADCY2Q08462 1091 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 AFAP1L2Q8N4X5 818 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 KIFAP3Q92845 792 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 TMEM47Q9BQJ4 181 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 NDEL1Q9GZM8 345 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 PCP4L1A6NKN8 68 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 LSM1O15116 133 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 CUL1Q13616 776 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 Q4G0T1 1027 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 HS2ST1Q7LGA3 356 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 DCAF4Q8WV16 495 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 TRAIPQ9BWF2 469 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 VPS16Q9H269 839 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 SCHIP1Q9P0W5 487 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 STK17AQ9UEE5 414 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 MAD2L2Q9UI95 211 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 BAZ2AQ9UIF9 1905 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 MYH2Q9UKX2 1941 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 PRDM1O75626 825 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 PDHBP11177 359 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 CCND1P24385 295 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 TUBA4AP68366 448 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 COBLL1Q53SF7 1204 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 TMEM110Q86TL2 294 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 FAM186BQ8IYM0 893 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 UHMK1Q8TAS1 419 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 AKT1S1Q96B36 256 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 NUF2Q9BZD4 464 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 TYW1Q9NV66 732 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 RWDD2AQ9UIY3 292 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 DIS3Q9Y2L1 958 aaKnown RBP6.54□□□□□ -1.36
PTPRD-214ENST00000540109 FHOD1Q9Y613 1164 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 ITIH6Q6UXX5 1313 aa6.54□□□□□ -1.36
PTPRD-214ENST00000540109 RASGRF2O14827 1237 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 TTLL1O95922 423 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 GSTA1P08263 222 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 USP17L8P0C7I0 530 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SRGNP10124 158 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NAPAP54920 295 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PNOCQ13519 176 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NCAPHQ15003 741 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC144BQ3MJ40 725 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ANKRD20A4Q4UJ75 823 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ANKRD20A8PQ5CZ79 823 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ANKRD20A2Q5SQ80 823 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ANKRD20A1Q5TYW2 823 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 STRIP1Q5VSL9 837 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 C16orf87Q6PH81 154 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 KIAA2013Q8IYS2 634 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 GABPB2Q8TAK5 448 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DDX23Q9BUQ8 820 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 MMRN2Q9H8L6 949 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 HACD3Q9P035 362 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RPL26L1Q9UNX3 145 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 UTP11Q9Y3A2 253 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SNED1Q8TER0 1413 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ARHGAP42A6NI28 874 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 KLRF2D3W0D1 207 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 KDM1AO60341 852 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 TMCC1O94876 653 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ZWINTO95229 277 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ECEL1O95672 775 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 KRT75O95678 551 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 CDC25CP30307 473 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RAD23BP54727 409 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NR5A1Q13285 461 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NCAPH2Q6IBW4 605 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 FOXP4Q8IVH2 680 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SYMPKQ92797 1274 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 CALML4Q96GE6 196 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms