RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 FRAT2O75474 233 aaPredicted RBP4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CLTBP09497 229 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 ZNF853P0CG23 659 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 RAG1P15918 1043 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CNGA1P29973 690 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 MAPK4P31152 587 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 HMGCS2P54868 508 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 TLE2Q04725 743 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 FPGSQ05932 587 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 SPP2Q13103 211 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 PABPC4Q13310 644 aaKnown RBP eCLIP4.91□□□□□ -1.62
C2CD3-214ENST00000540057 MFSD14CQ5VZR4 134 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CCDC129Q6ZRS4 1044 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 HDXQ7Z353 690 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 GPR142Q7Z601 462 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 TRPV1Q8NER1 839 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 GPRC5AQ8NFJ5 357 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 FRMD6Q96NE9 622 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 MIPEPQ99797 713 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.91□□□□□ -1.62
C2CD3-214ENST00000540057 PORCNQ9H237 461 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CD320Q9NPF0 282 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CNNM1Q9NRU3 951 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 USP40Q9NVE5 1235 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 C19orf73Q9NVV2 129 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 RBPJLQ9UBG7 517 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 SUGT1Q9Y2Z0 365 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 PCDHB5Q9Y5E4 795 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 LRRFIP2Q9Y608 721 aaKnown RBP4.91□□□□□ -1.62
C2CD3-214ENST00000540057 TACC3Q9Y6A5 838 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CAPN6Q9Y6Q1 641 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CHD9Q3L8U1 2897 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 UTYO14607 1347 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 CHD7Q9P2D1 2997 aa4.91□□□□□ -1.62
C2CD3-214ENST00000540057 ATAD5Q96QE3 1844 aa4.9□□□□□ -1.62
C2CD3-214ENST00000540057 ZNF503-AS2A6NEH8 195 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 DDTLA6NHG4 134 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-214ENST00000540057 KBTBD13C9JR72 458 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 GFRA2O00451 464 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 PRPF40AO75400 957 aaKnown RBP4.9□□□□□ -1.63
C2CD3-214ENST00000540057 EIF4BP23588 611 aaKnown RBP4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ADCYAP1R1P41586 468 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 RGS3P49796 1198 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 HERVK_113P62684 666 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 MESP2Q0VG99 397 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 SEPT6Q14141 434 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ZNF124Q15973 351 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 CCDC57Q2TAC2 916 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 TAF7LQ5H9L4 462 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 EPHA10Q5JZY3 1008 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 CCDC30Q5VVM6 783 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 FYB2Q5VWT5 728 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ANO1Q5XXA6 986 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 LMBR1LQ6UX01 489 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 G2E3Q7L622 706 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 PLEKHH3Q7Z736 793 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ZSWIM9Q86XI8 627 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 VPS37DQ86XT2 251 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 CCDC146Q8IYE0 955 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 MFSD4AQ8N468 514 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 C8orf58Q8NAV2 365 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ARRDC4Q8NCT1 418 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 NPLOC4Q8TAT6 608 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 RIN3Q8TB24 985 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 FERMT2Q96AC1 680 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 EDC3Q96F86 508 aaKnown RBP4.9□□□□□ -1.63
C2CD3-214ENST00000540057 HSPA12BQ96MM6 686 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 PUS3Q9BZE2 481 aaKnown RBP4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ATP13A1Q9HD20 1204 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 LMCD1Q9NZU5 365 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 ST14Q9Y5Y6 855 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 CLSPNQ9HAW4 1339 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 RFX7Q2KHR2 1363 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 WDFY4Q6ZS81 3184 aa4.9□□□□□ -1.63
C2CD3-214ENST00000540057 MYH13Q9UKX3 1938 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 ENTPD3O75355 529 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 CST3P01034 146 aaPredicted RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 CYBAP13498 195 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 HOXA7P31268 230 aaPredicted RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 CYP2C19P33261 490 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 RPS26P62854 115 aaKnown RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 IRX3P78415 501 aaPredicted RBP4.89□□□□□ -1.63
C2CD3-214ENST00000540057 FGD1P98174 961 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 LRRC41Q15345 812 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 CAVIN4Q5BKX8 364 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 TMEM240Q5SV17 173 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 SFRP5Q5T4F7 317 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 PRAMEF13Q5VWM6 474 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 LETMD1Q6P1Q0 360 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 AGMOQ6ZNB7 445 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 C16orf59Q7L2K0 433 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 HID1Q8IV36 788 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 TSPYL6Q8N831 410 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 MFSD2AQ8NA29 543 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 LINS1Q8NG48 757 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 HERVK_113Q902F9 699 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 UIMC1Q96RL1 719 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 TRAIPQ9BWF2 469 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 IDI2Q9BXS1 227 aa4.89□□□□□ -1.63
C2CD3-214ENST00000540057 KCNH6Q9H252 994 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms