RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 ZNF236Q9UL36 1845 aa7.31□□□□□ -1.24
SNHG1-212ENST00000539975 SYNRGQ9UMZ2 1314 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 CYP3A7-CYP3A51PA0A087WV96 503 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 TTLL8A6PVC2 850 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 STX6O43752 255 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 NEMFO60524 1076 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 DKC1O60832 514 aaKnown RBP eCLIP7.3□□□□□ -1.241e-36■■□□□ 12.2
SNHG1-212ENST00000539975 BMP15O95972 392 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 IGHA2P01877 340 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 ASGR1P07306 291 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 ITGB5P18084 799 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 EN2P19622 333 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 SYT1P21579 422 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 CYP3A7P24462 503 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 CIITAP33076 1130 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 ACLYP53396 1101 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 RELBQ01201 579 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 KRT76Q01546 638 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 ST3GAL1Q11201 340 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 ORC2Q13416 577 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 LRRC41Q15345 812 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 KCNA10Q16322 511 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 CALCRLQ16602 461 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 TMEM266Q2M3C6 531 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 Q4G0T1 1027 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 LRCH2Q5VUJ6 765 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 FAM160B1Q5W0V3 765 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 MIS18BP1Q6P0N0 1132 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 CCDC62Q6P9F0 684 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 PPTC7Q8NI37 304 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 SEPT1Q8WYJ6 367 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 GLG1Q92896 1179 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 RIT2Q99578 217 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 MTG1Q9BT17 334 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 TEKT3Q9BXF9 490 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 KATNBL1Q9H079 304 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 JPH1Q9HDC5 661 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 STARD7Q9NQZ5 370 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 SLC9A2Q9UBY0 812 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 DOLKQ9UPQ8 538 aa7.3□□□□□ -1.24
SNHG1-212ENST00000539975 GNEQ9Y223 722 aaKnown RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 DDX49Q9Y6V7 483 aaKnown RBP7.3□□□□□ -1.24
SNHG1-212ENST00000539975 ELP1O95163 1332 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 MROH7Q68CQ1 1323 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 COL11A1P12107 1806 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 FAM86B1E9PN63 330 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 M0R2N6 131 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 DDX39AO00148 427 aaKnown RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 LAD1O00515 517 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 BACH1O14867 736 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 TBX3O15119 743 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 TRAK2O60296 914 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 LZTS3O60299 673 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 SORBS3O60504 671 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 PSAPP07602 524 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 FAM86B2P0C5J1 330 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 ARP10275 920 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 GNAT1P11488 350 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 UBA1P22314 1058 aaKnown RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 U2AF2P26368 475 aaKnown RBP eCLIP7.29□□□□□ -1.242e-8■■■■□ 21.3
SNHG1-212ENST00000539975 CST5P28325 142 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 SFNP31947 248 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 MCM7P33993 719 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 JAK3P52333 1124 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 BEX3Q00994 111 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 ARHGAP1Q07960 439 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 FAM47CQ5HY64 1035 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 TTC38Q5R3I4 469 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 CKAP2LQ8IYA6 745 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 SMAP1Q8IYB5 467 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 C7orf31Q8N865 590 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 AFG1LQ8WV93 481 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 DPF3Q92784 378 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 FERMT2Q96AC1 680 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 PAWRQ96IZ0 340 aaKnown RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 ZNF396Q96N95 335 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 UPF3AQ9H1J1 476 aaKnown RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 SMARCAD1Q9H4L7 1026 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 AGO4Q9HCK5 861 aaKnown RBP7.29□□□□□ -1.24
SNHG1-212ENST00000539975 PCDHA12Q9UN75 941 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 NOD1Q9Y239 953 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 PLXNB2O15031 1838 aa7.29□□□□□ -1.24
SNHG1-212ENST00000539975 NFASCO94856 1347 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 A0A0U1RQG5 324 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-212ENST00000539975 DCDC2CA8MYV0 355 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 H3BRB1 525 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 CHMP2AO43633 222 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 ADAMTS4O75173 837 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 ARIH2O95376 493 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 TDP2O95551 362 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 MMP3P08254 477 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 SUPT20HL2P0C7V6 817 aa7.28□□□□□ -1.24
SNHG1-212ENST00000539975 TCF7P36402 384 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-212ENST00000539975 TXKP42681 527 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms