RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 UQCRFS1P1P0C7P4 283 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 XRCC5P13010 732 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 ELNP15502 786 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 GNAT2P19087 354 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 KRT9P35527 623 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 CYLC1P35663 651 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 NT5C2P49902 561 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 SEC13P55735 322 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 ERVK-24P63145 666 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 SART3Q15020 963 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 PLCB4Q15147 1175 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 KRT31Q15323 416 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 GADL1Q6ZQY3 521 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 CYB5R4Q7L1T6 521 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 BPHLQ86WA6 291 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 DZIP1Q86YF9 867 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 GLYCTKQ8IVS8 523 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 ZSCAN29Q8IWY8 852 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 ZFPM1Q8IX07 1006 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 NOA1Q8NC60 698 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 AENQ8WTP8 325 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 GTF3C2Q8WUA4 911 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 PAWRQ96IZ0 340 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 PURBQ96QR8 312 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 RHOXF2Q9BQY4 288 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 RNF26Q9BY78 433 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 PUS7LQ9H0K6 701 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 DOLKQ9UPQ8 538 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 KIAA1024Q9UPX6 916 aa8.46□□□□□ -1.06
CCDC60-204ENST00000539847 LUC7L2Q9Y383 392 aaKnown RBP8.46□□□□□ -1.06
CCDC60-204ENST00000539847 A0A1W2PQJ5 194 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GOLGA6CA6NDK9 693 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 DDTLA6NHG4 134 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 TMCO5BA8MYB1 307 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 BTBD18B2RXH4 712 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 AGPSO00116 658 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 SOX1O00570 391 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 EIF3HO15372 352 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 FSBPO95073 299 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 LDHCP07864 332 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GOLGA6DP0CG33 693 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 HNRNPH3P31942 346 aaKnown RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 PHKA1P46020 1223 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 HAND2P61296 217 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GSTO1P78417 241 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 SETQ01105 290 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 KCNB1Q14721 858 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 RTN1Q16799 776 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 TCP11X2Q5H9J9 407 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 MAP3K21Q5TCX8 1036 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 ZNF658Q5TYW1 1059 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 FOXR1Q6PIV2 292 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 CD302Q8IX05 232 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 CNPY4Q8N129 248 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 ANKRD13CQ8N6S4 541 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 ZNF280CQ8ND82 737 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 MAGEC3Q8TD91 643 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 SOCS4Q8WXH5 440 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 CAVIN3Q969G5 261 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 ASB16Q96NS5 453 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 STRBPQ96SI9 672 aaKnown RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 SLC26A6Q9BXS9 759 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 CAPS2Q9BXY5 557 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 CSRNP2Q9H175 543 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 RNF41Q9H4P4 317 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 THAP9Q9H5L6 903 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 ZSWIM4Q9H7M6 989 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GJB4Q9NTQ9 266 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GOLGA6AQ9NYA3 693 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 MORF4L1Q9UBU8 362 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 HERC5Q9UII4 1024 aaKnown RBP8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GJD2Q9UKL4 321 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 OGDHLQ9ULD0 1010 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 STXBP5LQ9Y2K9 1186 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 FAM169AQ9Y6X4 670 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 MGAMO43451 1857 aa8.45□□□□□ -1.06
CCDC60-204ENST00000539847 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 LGALS16A8MUM7 142 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 IFIT3O14879 490 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 PRPF3O43395 683 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 PCP11498 1178 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 MAPK1P28482 360 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 HNRNPH1P31943 449 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 BTDP43251 543 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 ZAP70P43403 619 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 DNM2P50570 870 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 RHBDL3P58872 404 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 PAK1Q13153 545 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 RASGRF1Q13972 1273 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 AKNAD1Q5T1N1 836 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 ARL6IP4Q66PJ3 421 aaKnown RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 FAM109BQ6ICB4 259 aaPredicted RBP8.44□□□□□ -1.06
CCDC60-204ENST00000539847 TBC1D10CQ8IV04 446 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 CCDC50Q8IVM0 306 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 TDHQ8IZJ6 230 aa8.44□□□□□ -1.06
CCDC60-204ENST00000539847 MREGQ8N565 214 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms