RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MKNK1Q9BUB5 465 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 ANO3Q9BYT9 981 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 OLFML3Q9NRN5 406 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 AMFRQ9UKV5 643 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 TMCO5BA8MYB1 307 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 EIF3DO15371 548 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBE3B-209ENST00000539584 MED24O75448 989 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 RFC4P35249 363 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 UAP1Q16222 522 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-209ENST00000539584 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 NT5DC3Q86UY8 548 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 CCDC50Q8IVM0 306 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 CRYGNQ8WXF5 182 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 CYFIP2Q96F07 1278 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 RBM17Q96I25 401 aaKnown RBP14.44□□□□□ -0.1
UBE3B-209ENST00000539584 NCAPGQ9BPX3 1015 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 CARD9Q9H257 536 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 DAGLAQ9Y4D2 1042 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 HLA-DOAP06340 250 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 TMEM253P0C7T8 217 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 DRG2P55039 364 aaKnown RBP14.44□□□□□ -0.1
UBE3B-209ENST00000539584 CCDC121Q6ZUS5 278 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 TMC3Q7Z5M5 1100 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 HOOK3Q86VS8 718 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 CATSPER3Q86XQ3 398 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 ETNPPLQ8TBG4 499 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 DCAF4Q8WV16 495 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 MKL1Q969V6 931 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 VTI1AQ96AJ9 217 aa14.44□□□□□ -0.1
UBE3B-209ENST00000539584 NCANO14594 1321 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 GOLGA6L10A0A0M3HER8 536 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 FAM187AA6NFU0 413 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 NR3C1P04150 777 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 HSPA6P17066 643 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 RFX1P22670 979 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 RNASE9P60153 205 aaKnown RBP14.43□□□□□ -0.1
UBE3B-209ENST00000539584 SPIRE1Q08AE8 756 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 ODF2Q5BJF6 829 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 TRAPPC3LQ5T215 181 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 FBXW10Q5XX13 1052 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 KCNV1Q6PIU1 500 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 DAAM2Q86T65 1068 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 GPIHBP1Q8IV16 184 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 CCDC24Q8N4L8 307 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
UBE3B-209ENST00000539584 RFFLQ8WZ73 363 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 SLC35C1Q96A29 364 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 POLR3CQ9BUI4 534 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-209ENST00000539584 STK33Q9BYT3 514 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 RABEP2Q9H5N1 569 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.43□□□□□ -0.1
UBE3B-209ENST00000539584 UBE4BO95155 1302 aa14.43□□□□□ -0.1
UBE3B-209ENST00000539584 USP17L10C9JJH3 530 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 MYO1FO00160 1098 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 AKAP3O75969 853 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 ACTN1P12814 892 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 GSCP56915 257 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 IRX3P78415 501 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 HDLBPQ00341 1268 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 POU5F1Q01860 360 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 DHX34Q14147 1143 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 TRADDQ15628 312 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 SLC30A5Q8TAD4 765 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 UBLCP1Q8WVY7 318 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 SIX2Q9NPC8 291 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 GCNT4Q9P109 453 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 CCNL1Q9UK58 526 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 PCDHA1Q9Y5I3 950 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 CHUKO15111 745 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 TBCAO75347 108 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 HPDP32754 393 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 CIITAP33076 1130 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 PSMC2P35998 433 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 SEC24CP53992 1094 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 PTENP60484 403 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 ARHGAP4P98171 946 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 ENOX2Q16206 610 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 SFR1Q86XK3 245 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 REEP2Q9BRK0 252 aa14.42□□□□□ -0.1
UBE3B-209ENST00000539584 DDX47Q9H0S4 455 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 PPANQ9NQ55 473 aaKnown RBP14.42□□□□□ -0.1
UBE3B-209ENST00000539584 MYH7BA7E2Y1 1941 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 DDX3XO00571 662 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 RASSF9O75901 435 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 EYA4O95677 639 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 NUDT17P0C025 328 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 MUTP22033 750 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 SHMT1P34896 483 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 SOX5P35711 763 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 HADHBP55084 474 aaKnown RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 IFT88Q13099 833 aa14.41□□□□□ -0.1
UBE3B-209ENST00000539584 BYSLQ13895 437 aaKnown RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 LACTB2Q53H82 288 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 DCAF17Q5H9S7 520 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-209ENST00000539584 RNF187Q5TA31 235 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms