RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SERINC5Q86VE9 423 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 C7orf31Q8N865 590 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 KRI1Q8N9T8 703 aaKnown RBP14.55□□□□□ -0.08
CCDC42-202ENST00000539522 NEK9Q8TD19 979 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 SNX29Q8TEQ0 813 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 PIGOQ8TEQ8 1089 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 SYMPKQ92797 1274 aaKnown RBP14.55□□□□□ -0.08
CCDC42-202ENST00000539522 ATP6V0A1Q93050 837 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 ZSWIM4Q9H7M6 989 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 BLOC1S4Q9NUP1 217 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 CFAP45Q9UL16 551 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 NRCAMQ92823 1304 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 IGKV6-21A0A0C4DH24 114 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 C17orf102A2RUQ5 167 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 E9PMD0 336 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 YWHABP31946 246 aaKnown RBP14.54□□□□□ -0.08
CCDC42-202ENST00000539522 CCT6AP40227 531 aaKnown RBP14.54□□□□□ -0.08
CCDC42-202ENST00000539522 RARRES1P49788 294 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 IGBP1P78318 339 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 KRT85P78386 507 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 KARSQ15046 597 aaKnown RBP14.54□□□□□ -0.08
CCDC42-202ENST00000539522 PTGISQ16647 500 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 MTHFD1LQ6UB35 978 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 AK8Q96MA6 479 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 PLIN2Q99541 437 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 CCSER1Q9C0I3 900 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 XPNPEP1Q9NQW7 623 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 DDX19AQ9NUU7 478 aaKnown RBP14.54□□□□□ -0.08
CCDC42-202ENST00000539522 SEPT9Q9UHD8 586 aaPredicted RBP14.54□□□□□ -0.08
CCDC42-202ENST00000539522 TCEAL9Q9UHQ7 104 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 KIAA1024Q9UPX6 916 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 COL1A2P08123 1366 aa14.54□□□□□ -0.08
CCDC42-202ENST00000539522 CUTAO60888 179 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 KLRC1P26715 233 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
CCDC42-202ENST00000539522 MTERF2Q49AM1 385 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 ZNF484Q5JVG2 852 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 CABP7Q86V35 215 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 CKAP2LQ8IYA6 745 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 C7orf61Q8IZ16 206 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 KCNG4Q8TDN1 519 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 NOC4LQ9BVI4 516 aaKnown RBP14.53□□□□□ -0.08
CCDC42-202ENST00000539522 SCAND2PQ9GZW5 306 aaPredicted RBP14.53□□□□□ -0.08
CCDC42-202ENST00000539522 WNT8AQ9H1J5 351 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 CYP26B1Q9NR63 512 aa14.53□□□□□ -0.08
CCDC42-202ENST00000539522 RANBP2P49792 3224 aaKnown RBP14.52□□□□□ -0.08
CCDC42-202ENST00000539522 KIAA0355O15063 1070 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 PRPF40AO75400 957 aaKnown RBP14.52□□□□□ -0.09
CCDC42-202ENST00000539522 CLTBP09497 229 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 PLCG1P19174 1290 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 RBL2Q08999 1139 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 MBTPS1Q14703 1052 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 E2F4Q16254 413 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 RESP18Q5W5W9 173 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 FAM167AQ96KS9 214 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 SPATA32Q96LK8 384 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 SEZ6LQ9BYH1 1024 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 GOLPH3LQ9H4A5 285 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 DHX33Q9H6R0 707 aaKnown RBP14.52□□□□□ -0.09
CCDC42-202ENST00000539522 ANKEF1Q9NU02 776 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 TUBE1Q9UJT0 475 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.09
CCDC42-202ENST00000539522 MROH7Q68CQ1 1323 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 MAFO75444 373 aaPredicted RBP14.51□□□□□ -0.09
CCDC42-202ENST00000539522 NCLP19338 710 aaKnown RBP14.51□□□□□ -0.09
CCDC42-202ENST00000539522 MUTP22033 750 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 MGAT3Q09327 533 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 PTK7Q13308 1070 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 KRT79Q5XKE5 535 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 HAUS3Q68CZ6 603 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 KIAA0319LQ8IZA0 1049 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 LRRC71Q8N4P6 559 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 TMEM87AQ8NBN3 555 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 ERMNQ8TAM6 284 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 MTRQ99707 1265 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 RAB34Q9BZG1 259 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 CDHR5Q9HBB8 845 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 NRBP2Q9NSY0 501 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 BMP2KQ9NSY1 1161 aaPredicted RBP14.51□□□□□ -0.09
CCDC42-202ENST00000539522 LMBRD1Q9NUN5 540 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 DBR1Q9UK59 544 aaKnown RBP14.51□□□□□ -0.09
CCDC42-202ENST00000539522 HPSEQ9Y251 543 aa14.51□□□□□ -0.09
CCDC42-202ENST00000539522 TET1Q8NFU7 2136 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 FAM237AA0A1B0GTK4 181 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 RRN3P2A6NIE6 340 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 GADD45BO75293 160 aaPredicted RBP14.5□□□□□ -0.09
CCDC42-202ENST00000539522 XRCC6P12956 609 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC42-202ENST00000539522 SYN1P17600 705 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 CYP2C18P33260 490 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 ME1P48163 572 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 CLCN3P51790 818 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 SLC12A3P55017 1021 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 TCTN1Q2MV58 587 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 ARSHQ5FYA8 562 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 ADALQ6DHV7 355 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 RPAINQ86UA6 219 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 DNAJB3Q8WWF6 145 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 CEP170P1Q96L14 293 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 NACC1Q96RE7 527 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms