RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 IRF2BP1Q8IU81 584 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 LRRC8AQ8IWT6 810 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 DYDC2Q96IM9 177 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 CDHR1Q96JP9 859 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 DUSP9Q99956 384 aaKnown RBP9.79□□□□□ -0.84
DDB1-213ENST00000539332 SENP7Q9BQF6 1050 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 THAP9Q9H5L6 903 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 IGSF5Q9NSI5 407 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 RNF186Q9NXI6 227 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 RGL1Q9NZL6 768 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 PKD2L1Q9P0L9 805 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 LIMA1Q9UHB6 759 aaKnown RBP9.79□□□□□ -0.84
DDB1-213ENST00000539332 NRBP1Q9UHY1 535 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 DIS3Q9Y2L1 958 aaKnown RBP9.79□□□□□ -0.84
DDB1-213ENST00000539332 CASP8AP2Q9UKL3 1982 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 NFASCO94856 1347 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 SIP14410 1827 aa9.79□□□□□ -0.84
DDB1-213ENST00000539332 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 ASB14A6NK59 587 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 TNPO2O14787 897 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 ATP8B1O43520 1251 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 TPM1P09493 284 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 ICAM3P32942 547 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 PMS1P54277 932 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 LACTBP83111 547 aaPredicted RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 KRT76Q01546 638 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 CYP4A11Q02928 519 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 SPAG1Q07617 926 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 MAP2K5Q13163 448 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 GIT2Q14161 759 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 FAM26FQ5R3K3 315 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 TEX35Q5T0J7 233 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 SEPT14Q6ZU15 432 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 ARMCX2Q7L311 632 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 EEPD1Q7L9B9 569 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 VSTM4Q8IW00 320 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 CCDC65Q8IXS2 484 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 NOC3LQ8WTT2 800 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 P2RX5Q93086 422 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 MAML3Q96JK9 1138 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 ARGLU1Q9NWB6 273 aaPredicted RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 SLC5A4Q9NY91 659 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 KCND2Q9NZV8 630 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 WRAP73Q9P2S5 460 aaPredicted RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 TRIM49BA6NDI0 452 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 SERPINC1P01008 464 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 P4HBP07237 508 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 HOXC6P09630 235 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 KCNA2P16389 499 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 HSPA6P17066 643 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 SFNP31947 248 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 PBX1P40424 430 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 FCGRTP55899 365 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 LRMPQ12912 555 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 CTTNQ14247 550 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 NR1I3Q14994 352 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 ZCWPW2Q504Y3 356 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 MAMDC4Q6UXC1 1216 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 C1orf186Q6ZWK4 172 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 MIER3Q7Z3K6 550 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 NPLOC4Q8TAT6 608 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 IPO4Q8TEX9 1081 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 CACTINQ8WUQ7 758 aaKnown RBP9.78□□□□□ -0.84
DDB1-213ENST00000539332 SOCS4Q8WXH5 440 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 USP6NLQ92738 828 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 NACC1Q96RE7 527 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 CTAGE1Q96RT6 745 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 LXNQ9BS40 222 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 ARHGAP39Q9C0H5 1083 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 BHMT2Q9H2M3 363 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 PANK4Q9NVE7 773 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 GJD2Q9UKL4 321 aa9.78□□□□□ -0.84
DDB1-213ENST00000539332 DDX39AO00148 427 aaKnown RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 CHMP2AO43633 222 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SNAI1O95863 264 aaPredicted RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 CCNE2O96020 404 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 TGFB3P10600 412 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SKILP12757 684 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 IDEP14735 1019 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 PSMC4P43686 418 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 JAK3P52333 1124 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 ZNF131P52739 623 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SP2Q02086 613 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 SP3Q02447 781 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 TBX2Q13207 712 aaPredicted RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 KRT31Q15323 416 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 TCP11X2Q5H9J9 407 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 RINT1Q6NUQ1 792 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 EPM2AIP1Q7L775 607 aaPredicted RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 FILIP1Q7Z7B0 1213 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 ZC3H3Q8IXZ2 948 aaKnown RBP9.77□□□□□ -0.85
DDB1-213ENST00000539332 CCDC150Q8NCX0 1101 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 HPS3Q969F9 1004 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 REEP2Q9BRK0 252 aa9.77□□□□□ -0.85
DDB1-213ENST00000539332 TINF2Q9BSI4 451 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms