RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 HSP90B2PQ58FF3 399 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 PLCB1Q9NQ66 1216 aa27.3■■□□□ 1.96
RAB40C-204ENST00000538492 GAP43P17677 238 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 SLC7A5Q01650 507 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 EPHA7Q15375 998 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 ZNF572Q7Z3I7 529 aaPredicted RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 IRF2BP2Q7Z5L9 587 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 DNAAF5Q86Y56 855 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 DMGDHQ9UI17 866 aaKnown RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 COL4A5P29400 1685 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 TNS1Q9HBL0 1735 aaKnown RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 EN1Q05925 392 aaPredicted RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 ZNF571Q7Z3V5 609 aaPredicted RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 LDHDQ86WU2 507 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 RBM46Q8TBY0 533 aaKnown RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 UNC45AQ9H3U1 944 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 PACSIN2Q9UNF0 486 aaPredicted RBP27.29■■□□□ 1.96
RAB40C-204ENST00000538492 ZMYM2Q9UBW7 1377 aa27.29■■□□□ 1.96
RAB40C-204ENST00000538492 TTLL6Q8N841 843 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 PARVGQ9HBI0 331 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 METTL14Q9HCE5 456 aaKnown RBP27.28■■□□□ 1.96
RAB40C-204ENST00000538492 AJAP1Q9UKB5 411 aaPredicted RBP27.28■■□□□ 1.96
RAB40C-204ENST00000538492 PAFAH1B1P43034 410 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 COG2Q14746 738 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 GJB7Q6PEY0 223 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 ACBD3Q9H3P7 528 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 GCNT4Q9P109 453 aa27.28■■□□□ 1.96
RAB40C-204ENST00000538492 SLC16A3O15427 465 aaKnown RBP27.27■■□□□ 1.96
RAB40C-204ENST00000538492 ITIH3Q06033 890 aa27.27■■□□□ 1.96
RAB40C-204ENST00000538492 GBP6Q6ZN66 633 aa27.27■■□□□ 1.96
RAB40C-204ENST00000538492 SELENOOQ9BVL4 669 aa27.27■■□□□ 1.96
RAB40C-204ENST00000538492 PKD2L1Q9P0L9 805 aa27.27■■□□□ 1.96
RAB40C-204ENST00000538492 HPCAL4Q9UM19 191 aa27.27■■□□□ 1.96
RAB40C-204ENST00000538492 RBBP6Q7Z6E9 1792 aaKnown RBP27.27■■□□□ 1.96
RAB40C-204ENST00000538492 DDX39AO00148 427 aaKnown RBP27.27■■□□□ 1.96
RAB40C-204ENST00000538492 AGBL1Q96MI9 1066 aa27.27■■□□□ 1.96
RAB40C-204ENST00000538492 CAP2P40123 477 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 BANK1Q8NDB2 785 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 EHMT1Q9H9B1 1298 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 RBM12Q9NTZ6 932 aaKnown RBP27.26■■□□□ 1.95
RAB40C-204ENST00000538492 STK32BQ9NY57 414 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 SHTN1A0MZ66 631 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 LMAN1P49257 510 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 VIPAS39Q9H9C1 493 aa27.26■■□□□ 1.95
RAB40C-204ENST00000538492 A0A0U1RQG5 324 aaPredicted RBP27.25■■□□□ 1.95
RAB40C-204ENST00000538492 RTKN2Q8IZC4 609 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 KCTD17Q8N5Z5 321 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 EXOC4Q96A65 974 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 SIX2Q9NPC8 291 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 KIF13BQ9NQT8 1826 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 IPO5O00410 1097 aaKnown RBP27.25■■□□□ 1.95
RAB40C-204ENST00000538492 EIF3DO15371 548 aaKnown RBP eCLIP27.25■■□□□ 1.95
RAB40C-204ENST00000538492 RXRBP28702 533 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 FAM186BQ8IYM0 893 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 FAM71BQ8TC56 605 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 NACC1Q96RE7 527 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 LXNQ9BS40 222 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 TSKSQ9UJT2 592 aa27.25■■□□□ 1.95
RAB40C-204ENST00000538492 FAM160B2Q86V87 743 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 FAM178BQ8IXR5 827 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 PCDHGC5Q9Y5F6 944 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 FRMPD4Q14CM0 1322 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 CFAP221Q4G0U5 840 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 FIZ1Q96SL8 496 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 WDR11Q9BZH6 1224 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 FEM1BQ9UK73 627 aa27.24■■□□□ 1.95
RAB40C-204ENST00000538492 PSMC2P35998 433 aaKnown RBP27.23■■□□□ 1.95
RAB40C-204ENST00000538492 ODR4Q5SWX8 454 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 ZNF720Q7Z2F6 126 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 BORCS6Q96GS4 357 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 PSMD1Q99460 953 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 TEKT3Q9BXF9 490 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 CCDC66A2RUB6 948 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 GRID2IPA4D2P6 1211 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 INPP5BP32019 993 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 RIN2Q8WYP3 895 aaPredicted RBP27.23■■□□□ 1.95
RAB40C-204ENST00000538492 MED4Q9NPJ6 270 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 CCPG1Q9ULG6 757 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 MYH11P35749 1972 aa27.23■■□□□ 1.95
RAB40C-204ENST00000538492 SYF2O95926 243 aaKnown RBP27.22■■□□□ 1.95
RAB40C-204ENST00000538492 CYP2J2P51589 502 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 RNASE9P60153 205 aaKnown RBP27.22■■□□□ 1.95
RAB40C-204ENST00000538492 NBPF9Q3BBW0 867 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 MEI1Q5TIA1 1274 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 GOLPH3Q9H4A6 298 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 NAGPAQ9UK23 515 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 BZW2Q9Y6E2 419 aaKnown RBP27.22■■□□□ 1.95
RAB40C-204ENST00000538492 ITGB5P18084 799 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 SETQ01105 290 aaPredicted RBP27.22■■□□□ 1.95
RAB40C-204ENST00000538492 PLS1Q14651 629 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 C8orf74Q6P047 294 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 MAEAQ7L5Y9 396 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 AENQ8WTP8 325 aaKnown RBP27.22■■□□□ 1.95
RAB40C-204ENST00000538492 ZNF341Q9BYN7 854 aa27.22■■□□□ 1.95
RAB40C-204ENST00000538492 TBC1D12O60347 775 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 TEX2Q8IWB9 1127 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 COL20A1Q9P218 1284 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 ZC3H4Q9UPT8 1303 aaKnown RBP27.21■■□□□ 1.95
RAB40C-204ENST00000538492 PLA2G6O60733 806 aa27.21■■□□□ 1.95
RAB40C-204ENST00000538492 PTPROQ16827 1216 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms