RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 DBR1Q9UK59 544 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 BECN2A8MW95 431 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 USO1O60763 962 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ATG7O95352 703 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 OATP04181 439 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SLC26A2P50443 739 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 NLRP12P59046 1061 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TPM4P67936 248 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 UGCGQ16739 394 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TPD52L1Q16890 204 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 HERC4Q5GLZ8 1057 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GNASQ5JWF2 1037 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 FAM102BQ5T8I3 360 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PLA2G4FQ68DD2 849 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 B3GNT9Q6UX72 402 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PLPPR4Q7Z2D5 763 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 EXOC8Q8IYI6 725 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MYCT1Q8N699 235 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 Q9Y3F1 56 aa11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MYH9P35579 1960 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PVALEFA0A1B0GWK0 134 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MYMKA6NI61 221 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GOLGA6L19H0YKK7 550 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZBTB39O15060 712 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SEPT4O43236 478 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KPNA6O60684 536 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DUSP11O75319 330 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KIF20AO95235 890 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LYPLA2O95372 231 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MMP3P08254 477 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 HSPA8P11142 646 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TIE1P35590 1138 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZNF445P59923 1031 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 IGBP1P78318 339 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DPYDQ12882 1025 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 NAALADL2Q58DX5 795 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TMEM63BQ5T3F8 832 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SH3RF1Q7Z6J0 888 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 IFT74Q96LB3 600 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 JPH2Q9BR39 696 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SH2D3AQ9BRG2 576 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TRIM9Q9C026 710 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KATNBL1Q9H079 304 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 XPNPEP3Q9NQH7 507 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KCND2Q9NZV8 630 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MAN1B1Q9UKM7 699 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MAFBQ9Y5Q3 323 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.52
TNFRSF1A-211ENST00000538363 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GOLGA6L3A6NEY3 463 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 H3BRB1 525 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 HBP1O60381 514 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MSCO60682 206 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CAVIN2O95810 425 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 INHAP05111 366 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LGALS2P05162 132 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CYBAP13498 195 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GAP43P17677 238 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CYP11B2P19099 503 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RFC5P40937 340 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DNM2P50570 870 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SLC12A3P55017 1021 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 NPEPPSP55786 919 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 BEX3Q00994 111 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TRIM32Q13049 653 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PSMD2Q13200 908 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 FSCN1Q16658 493 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ANO6Q4KMQ2 910 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZNF484Q5JVG2 852 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KLHL10Q6JEL2 608 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 AFAP1L1Q8TED9 768 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TIPINQ9BVW5 301 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SUGCTQ9HAC7 445 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms