RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
CCDC60-203ENST00000536742 HDAC8Q9BY41 377 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 LMCD1Q9NZU5 365 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 ABCC4O15439 1325 aa8.49□□□□□ -1.05
CCDC60-203ENST00000536742 IBTKQ9P2D0 1353 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-203ENST00000536742 KIF20BQ96Q89 1820 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 CCL15-CCL14A0A0B4J2E2 113 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 ADCY3O60266 1144 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 SUSD5O60279 629 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 EPHX1P07099 455 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 SHHQ15465 462 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 CCL15Q16663 113 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 GAB4Q2WGN9 574 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 DCAF15Q66K64 600 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 POMZP3Q6PJE2 187 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 CBLL1Q75N03 491 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 FAM43AQ8N2R8 423 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 BRI3BPQ8WY22 251 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 KRTAP4-12Q9BQ66 201 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 CHST7Q9NS84 486 aa8.48□□□□□ -1.05
CCDC60-203ENST00000536742 SF3B6Q9Y3B4 125 aaKnown RBP8.48□□□□□ -1.05
CCDC60-203ENST00000536742 COL1A1P02452 1464 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-203ENST00000536742 H3BS24 57 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 AGRPO00253 132 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 GSNP06396 782 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
CCDC60-203ENST00000536742 MMP14P50281 582 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 BNIP3Q12983 259 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 C17orf99Q6UX52 265 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 OPTNQ96CV9 577 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 UIMC1Q96RL1 719 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 DSCC1Q9BVC3 393 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 SUSD2Q9UGT4 822 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
CCDC60-203ENST00000536742 KMT2BQ9UMN6 2715 aaPredicted RBP8.47□□□□□ -1.05
CCDC60-203ENST00000536742 WNT10BO00744 389 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 PDPK1O15530 556 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 TPP2P29144 1249 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-203ENST00000536742 CTGFP29279 349 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 PRKCZQ05513 592 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 GRB10Q13322 594 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 HLFQ16534 295 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 SUPT20HL1Q3ZLR7 823 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 ZNF790Q6PG37 636 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 ZNF574Q6ZN55 896 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-203ENST00000536742 TMC3Q7Z5M5 1100 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 SPRED2Q7Z698 418 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 MICAL1Q8TDZ2 1067 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 UBE2FQ969M7 185 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 SGSM3Q96HU1 749 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 LNPKQ9C0E8 428 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 ST7Q9NRC1 585 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 FZD1Q9UP38 647 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 DUOX1Q9NRD9 1551 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 SPTBN4Q9H254 2564 aa8.46□□□□□ -1.06
CCDC60-203ENST00000536742 BIN1O00499 593 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 PRAMEF1O95521 474 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 ZNF445P59923 1031 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 IFRD2Q12894 506 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 SNW1Q13573 536 aaKnown RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 ADAT2Q7Z6V5 191 aaKnown RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 ARHGEF39Q8N4T4 335 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 CCDC120Q96HB5 630 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 DEPDC7Q96QD5 511 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 GFOD1Q9NXC2 390 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 POLKQ9UBT6 870 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 DUSP13Q9UII6 198 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 PPP2R3BQ9Y5P8 575 aa8.45□□□□□ -1.06
CCDC60-203ENST00000536742 DDX60LQ5H9U9 1706 aaKnown RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-203ENST00000536742 SHISA3A0PJX4 238 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 B2RBV5 119 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 NOP56O00567 594 aaKnown RBP8.44□□□□□ -1.06
CCDC60-203ENST00000536742 PCBP3P57721 371 aaKnown RBP8.44□□□□□ -1.06
CCDC60-203ENST00000536742 RASA3Q14644 834 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 LCE3BQ5TA77 95 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 CWF19L1Q69YN2 538 aaKnown RBP8.44□□□□□ -1.06
CCDC60-203ENST00000536742 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
CCDC60-203ENST00000536742 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 ZBTB38Q8NAP3 1195 aaPredicted RBP8.44□□□□□ -1.06
CCDC60-203ENST00000536742 DEFB129Q9H1M3 183 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 FAM86C1Q9NVL1 165 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 SUGT1Q9Y2Z0 365 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 USP34Q70CQ2 3546 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 SCN9AQ15858 1988 aa8.44□□□□□ -1.06
CCDC60-203ENST00000536742 ATRXP46100 2492 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 ERVV-1B6SEH8 477 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 CETPP11597 493 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 NOP2P46087 812 aaKnown RBP8.43□□□□□ -1.06
CCDC60-203ENST00000536742 POU4F1Q01851 419 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 IKZF1Q13422 519 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 GRAPQ13588 217 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 SLC10A6Q3KNW5 377 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 ZNF792Q3KQV3 632 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 SLC10A5Q5PT55 438 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms