RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 IL33O95760 270 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 GLI1P08151 1106 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PTGS1P23219 599 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 TBX4P57082 545 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 SRSF2Q01130 221 aaKnown RBP7.08□□□□□ -1.28
PRKDC-208ENST00000536710 ROM1Q03395 351 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 TCIRG1Q13488 830 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 FSCN1Q16658 493 aaKnown RBP7.08□□□□□ -1.28
PRKDC-208ENST00000536710 FAM102BQ5T8I3 360 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 VASNQ6EMK4 673 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 SLFN12LQ6IEE8 588 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 MPZL3Q6UWV2 235 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 ZSWIM9Q86XI8 627 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 MIB1Q86YT6 1006 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 IRF2BP1Q8IU81 584 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 TPH2Q8IWU9 490 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 WDR48Q8TAF3 677 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 BTBD7Q9P203 1132 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 RBPJLQ9UBG7 517 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 ANKRD6Q9Y2G4 727 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 GIT1Q9Y2X7 761 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA9Q9Y5G4 932 aaKnown RBP7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA8Q9Y5G5 932 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA7Q9Y5G6 932 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA6Q9Y5G7 932 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA3Q9Y5H0 932 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PCDHGA2Q9Y5H1 932 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
PRKDC-208ENST00000536710 GOLGA6CA6NDK9 693 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 GOLGA6BA6NDN3 693 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 BIN1O00499 593 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 KIF3BO15066 747 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 RFPL1O75677 317 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 PRLP01236 227 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 LPLP06858 475 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 ENO2P09104 434 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-208ENST00000536710 GOLGA6DP0CG33 693 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 OSMP13725 252 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 MANFP55145 182 aaKnown RBP7.07□□□□□ -1.28
PRKDC-208ENST00000536710 YBX1P67809 324 aaKnown RBP7.07□□□□□ -1.28
PRKDC-208ENST00000536710 ADCY2Q08462 1091 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.07□□□□□ -1.28
PRKDC-208ENST00000536710 ZBTB41Q5SVQ8 909 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 TMC5Q6UXY8 1006 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 ZNF605Q86T29 641 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 TCEAL8Q8IYN2 117 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 FAM26EQ8N5C1 309 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 CALML6Q8TD86 181 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 NGRNQ9NPE2 291 aaKnown RBP7.07□□□□□ -1.28
PRKDC-208ENST00000536710 GOLGA6AQ9NYA3 693 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
PRKDC-208ENST00000536710 PRSS38A1L453 326 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 ELL2O00472 640 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-208ENST00000536710 PRPF3O43395 683 aaKnown RBP7.06□□□□□ -1.28
PRKDC-208ENST00000536710 VIPR1P32241 457 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 RGS3P49796 1198 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 KRT85P78386 507 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 PFKPQ01813 784 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 ALDH6A1Q02252 535 aaKnown RBP7.06□□□□□ -1.28
PRKDC-208ENST00000536710 MYBPC3Q14896 1274 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 CR1LQ2VPA4 569 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 TMEM240Q5SV17 173 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 TTC8Q8TAM2 541 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 RELTQ969Z4 430 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 HSPBAP1Q96EW2 488 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 TEKT5Q96M29 485 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 LRGUKQ96M69 825 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 FOXB1Q99853 325 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 INCENPQ9NQS7 918 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 GPR45Q9Y5Y3 372 aa7.06□□□□□ -1.28
PRKDC-208ENST00000536710 ZNF839A8K0R7 811 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 NFIBO00712 420 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 ASGR2P07307 311 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 HTRA3P83110 453 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 SRSF3P84103 164 aaKnown RBP7.05□□□□□ -1.28
PRKDC-208ENST00000536710 PITRM1Q5JRX3 1037 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 NXNQ6DKJ4 435 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 KIAA1841Q6NSI8 718 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 MAGEB6Q8N7X4 407 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 JADE3Q92613 823 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 RPGRQ92834 1020 aaKnown RBP7.05□□□□□ -1.28
PRKDC-208ENST00000536710 SLC2A13Q96QE2 648 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 ORAI2Q96SN7 254 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 TCF7L1Q9HCS4 588 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 SIRT5Q9NXA8 310 aa7.05□□□□□ -1.28
PRKDC-208ENST00000536710 PNMA8BQ9ULN7 279 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-208ENST00000536710 OAS3Q9Y6K5 1087 aaKnown RBP7.05□□□□□ -1.28
PRKDC-208ENST00000536710 PCDH8O95206 1070 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 U2AF1L5P0DN76 240 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-208ENST00000536710 NCAM1P13591 858 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 MTHFD2P13995 350 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 MC3RP41968 323 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 GLRBP48167 497 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 NCKAP1LP55160 1127 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 U2AF1Q01081 240 aaKnown RBP eCLIP7.04□□□□□ -1.28
PRKDC-208ENST00000536710 SKIDA1Q1XH10 827 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 GFOD2Q3B7J2 385 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 ARTNQ5T4W7 220 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms