RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 PSMB7Q99436 277 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 SLC24A3Q9HC58 644 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 YBX3P16989 372 aaKnown RBP eCLIP23.46■■□□□ 1.35
TRIM3-214ENST00000536344 SLFN12Q8IYM2 578 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 SMCR8Q8TEV9 937 aaPredicted RBP23.46■■□□□ 1.35
TRIM3-214ENST00000536344 DUSP9Q99956 384 aaKnown RBP23.46■■□□□ 1.35
TRIM3-214ENST00000536344 RIPK3Q9Y572 518 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 ADM5C9JUS6 153 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 PIK3CDO00329 1044 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 WDR46O15213 610 aaKnown RBP23.46■■□□□ 1.35
TRIM3-214ENST00000536344 NEDD9Q14511 834 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 GPC2Q8N158 579 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 CCDC47Q96A33 483 aaKnown RBP23.46■■□□□ 1.35
TRIM3-214ENST00000536344 KLC4Q9NSK0 619 aa23.46■■□□□ 1.35
TRIM3-214ENST00000536344 CTDP1Q9Y5B0 961 aaPredicted RBP23.46■■□□□ 1.35
TRIM3-214ENST00000536344 MACROD2A1Z1Q3 448 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 ICAM1P05362 532 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 Q4G0T1 1027 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 TTI2Q6NXR4 508 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 NSMFQ6X4W1 530 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 RNPC3Q96LT9 517 aaKnown RBP23.45■■□□□ 1.34
TRIM3-214ENST00000536344 SEMA6BQ9H3T3 888 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 CHUKO15111 745 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 KRT18P05783 430 aaKnown RBP23.45■■□□□ 1.34
TRIM3-214ENST00000536344 SPATA31C1P0DKV0 1188 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 RDXP35241 583 aaKnown RBP23.45■■□□□ 1.34
TRIM3-214ENST00000536344 COPB1P53618 953 aaKnown RBP23.45■■□□□ 1.34
TRIM3-214ENST00000536344 DCAF15Q66K64 600 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 MAGEF1Q9HAY2 307 aa23.45■■□□□ 1.34
TRIM3-214ENST00000536344 A1CFQ9NQ94 594 aaKnown RBP23.45■■□□□ 1.34
TRIM3-214ENST00000536344 ITIH6Q6UXX5 1313 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 MYL1P05976 194 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 EIF2AK2P19525 551 aaKnown RBP23.44■■□□□ 1.34
TRIM3-214ENST00000536344 SATB1Q01826 763 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 NAA35Q5VZE5 725 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 WDR59Q6PJI9 974 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 NELFCDQ8IXH7 590 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 DNAJC19Q96DA6 116 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 VAV3Q9UKW4 847 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 BACE1P56817 501 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 LRCH2Q5VUJ6 765 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 UNC13DQ70J99 1090 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 CEP57Q86XR8 500 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 TPH2Q8IWU9 490 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 CLEC4DQ8WXI8 215 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 P2RX5Q93086 422 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 NAP1L4Q99733 375 aaKnown RBP23.44■■□□□ 1.34
TRIM3-214ENST00000536344 SYT17Q9BSW7 474 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 HAUS4Q9H6D7 363 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 ODF2LQ9ULJ1 636 aa23.44■■□□□ 1.34
TRIM3-214ENST00000536344 GOLGA8KD6RF30 607 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 CYP27A1Q02318 531 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 UBXN1Q04323 297 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 IFT88Q13099 833 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 SPRED3Q2MJR0 410 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 ZNF280CQ8ND82 737 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 FAXDC2Q96IV6 333 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 NAP1L1P55209 391 aaKnown RBP23.43■■□□□ 1.34
TRIM3-214ENST00000536344 CNNM4Q6P4Q7 775 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 B4GALNT4Q76KP1 1039 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 GPIHBP1Q8IV16 184 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 CCDC13Q8IYE1 715 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 ZIM3Q96PE6 472 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 WDR11Q9BZH6 1224 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 PANK4Q9NVE7 773 aa23.43■■□□□ 1.34
TRIM3-214ENST00000536344 CENPFP49454 3210 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 SFI1A8K8P3 1242 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 CXCR5P32302 372 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 COASYQ13057 564 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 PREPLQ4J6C6 727 aaPredicted RBP23.42■■□□□ 1.34
TRIM3-214ENST00000536344 ARSHQ5FYA8 562 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 MOB2Q70IA6 237 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 APOBEC3FQ8IUX4 373 aaKnown RBP23.42■■□□□ 1.34
TRIM3-214ENST00000536344 LPAR1Q92633 364 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 EIF2AK1Q9BQI3 630 aaKnown RBP23.42■■□□□ 1.34
TRIM3-214ENST00000536344 BHMT2Q9H2M3 363 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 SLC38A10Q9HBR0 1119 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 CIITAP33076 1130 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 LSP1P33241 339 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 SKOR1P84550 965 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 CEP55Q53EZ4 464 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 KIAA1328Q86T90 577 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 KLRG1Q96E93 195 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 TAAR1Q96RJ0 339 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 PPP1R9AQ9ULJ8 1098 aa23.42■■□□□ 1.34
TRIM3-214ENST00000536344 RSPH10B2B2RC85 870 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 RSPH10BP0C881 870 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 MYCLP12524 364 aaPredicted RBP23.41■■□□□ 1.34
TRIM3-214ENST00000536344 ITGB5P18084 799 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 RPS6P62753 249 aaKnown RBP23.41■■□□□ 1.34
TRIM3-214ENST00000536344 NNTQ13423 1086 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 PLS1Q14651 629 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 CCDC40Q4G0X9 1142 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 HERC4Q5GLZ8 1057 aaPredicted RBP23.41■■□□□ 1.34
TRIM3-214ENST00000536344 SH2D3AQ9BRG2 576 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 NT5C3AQ9H0P0 336 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 B4DLN1 442 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 NEBLO76041 1014 aa23.41■■□□□ 1.34
TRIM3-214ENST00000536344 CYP11B2P19099 503 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms