RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 NPEPPSP55786 919 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MGAT3Q09327 533 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MTERF2Q49AM1 385 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FAM26DQ5JW98 314 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DEFB128Q7Z7B8 93 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TPH2Q8IWU9 490 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 LINC01465Q8N7H1 131 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FAM49AQ9H0Q0 323 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 NRBP2Q9NSY0 501 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CLIC4Q9Y696 253 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MICAL3Q7RTP6 2002 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 A0A087WWV3 80 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PP2D1A8MPX8 630 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CAND2O75155 1236 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 LYPLA2O95372 231 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CDC25AP30304 524 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 YWHABP31946 246 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CLCN3P51790 818 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PTPAQ15257 358 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ECM1Q16610 540 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ZNF365Q70YC5 407 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 NEK9Q8TD19 979 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ZSWIM4Q9H7M6 989 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RANBP2P49792 3224 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 IGKV6-21A0A0C4DH24 114 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CXCL10P02778 98 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RPA1P27694 616 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RFC2P35250 354 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 GRIN1Q05586 938 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TMEM62Q0P6H9 643 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DRP2Q13474 957 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TMEM266Q2M3C6 531 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 HABP4Q5JVS0 413 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RASIP1Q5U651 963 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 POTEGQ6S5H5 508 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DTHD1Q6ZMT9 781 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 LRRC71Q8N4P6 559 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 USP28Q96RU2 1077 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ZSCAN16Q9H4T2 348 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CYP26B1Q9NR63 512 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ZDHHC9Q9Y397 364 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
TNFRSF1A-208ENST00000536194 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 VWA3AA6NCI4 1184 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MAGEB2O15479 319 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 F13A1P00488 732 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 VTNP04004 478 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MRPS6P82932 125 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CEBPZQ03701 1054 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TBC1D8BQ0IIM8 1120 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 BECN1Q14457 450 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PDIA5Q14554 519 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ARL6IP4Q66PJ3 421 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PSRC1Q6PGN9 363 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 OTOP2Q7RTS6 562 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 METTL13Q8N6R0 699 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PIGOQ8TEQ8 1089 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 HERVK_113Q902F9 699 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CEP170P1Q96L14 293 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PPP1R16BQ96T49 567 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TCHHQ07283 1943 aa12.66□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 GPR32O75388 356 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PARNO95453 639 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 BMP15O95972 392 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FGBP02675 491 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PFKMP08237 780 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 GHRP10912 638 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CCT6AP40227 531 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RARRES1P49788 294 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 LPIN1Q14693 890 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PLEKHG4Q58EX7 1191 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 XKR9Q5GH70 373 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FBXO47Q5MNV8 452 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms