RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CAPN6Q9Y6Q1 641 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 ZMYM2Q9UBW7 1377 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 FRMPD4Q14CM0 1322 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 ANO9A1A5B4 782 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 FLOT1O75955 427 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 BCRP11274 1271 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 ACTN1P12814 892 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 VCAM1P19320 739 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 SLC9A1P19634 815 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 MRPS9P82933 396 aaKnown RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 NBPF12Q5TAG4 269 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 DPY19L2P1Q6NXN4 242 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 RPGRIP1Q96KN7 1286 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 ZCCHC17Q9NP64 241 aaKnown RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 MYH10P35580 1976 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 EIF3DO15371 548 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 XRCC5P13010 732 aaKnown RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 MAGEA1P43355 309 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 ZNF131P52739 623 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 DCAF17Q5H9S7 520 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 MCF2L2Q86YR7 1114 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 CNOT7Q9UIV1 285 aaKnown RBP14.68□□□□□ -0.06
VPS33B-202ENST00000535906 SALL4Q9UJQ4 1053 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 BCS1LQ9Y276 419 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 GJA3Q9Y6H8 435 aa14.68□□□□□ -0.06
VPS33B-202ENST00000535906 AFPP02771 609 aaKnown RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 SERPING1P05155 500 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 RPL13P26373 211 aaKnown RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 GHRHRQ02643 423 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 RASSF7Q02833 373 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 ARID5AQ03989 594 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 RAPGEF1Q13905 1077 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 TKFCQ3LXA3 575 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 ZNF720Q7Z2F6 126 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 SYTL5Q8TDW5 730 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 PPP1R9AQ9ULJ8 1098 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 PCDHB13Q9Y5F0 798 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 CCDC66A2RUB6 948 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 MOCS3O95396 460 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 RPS6P62753 249 aaKnown RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 CKAP4Q07065 602 aaKnown RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 GPS2Q13227 327 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 ITGB3BPQ13352 177 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 COG2Q14746 738 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 TCERG1LQ5VWI1 586 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 ANKRD13CQ8N6S4 541 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 FAM133AQ8N9E0 248 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 TRIM58Q8NG06 486 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 SLC35C1Q96A29 364 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 CAPZA3Q96KX2 299 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 TAAR1Q96RJ0 339 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 RPAP3Q9H6T3 665 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-202ENST00000535906 AIPL1Q9NZN9 384 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 UBIAD1Q9Y5Z9 338 aa14.67□□□□□ -0.06
VPS33B-202ENST00000535906 H3BQF6 201 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 RBAK-RBAKDNI3L0D1 243 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 ZNF185O15231 689 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 SLC16A3O15427 465 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 PJA2O43164 708 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 EPB41P11171 864 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 PON1P27169 355 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 USP14P54578 494 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 SPP2Q13103 211 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 ODR4Q5SWX8 454 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 PCNX4Q63HM2 1172 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 MIER3Q7Z3K6 550 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 FAM178BQ8IXR5 827 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 BORCS6Q96GS4 357 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 WNK4Q96J92 1243 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 METTL14Q9HCE5 456 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 JADE2Q9NQC1 790 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 KCND2Q9NZV8 630 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 ODF2LQ9ULJ1 636 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 MYH11P35749 1972 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 EIF3JO75822 258 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 EIF2AK2P19525 551 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 ENOX2Q16206 610 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 EXOC3L4Q17RC7 722 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 NIPA1Q7RTP0 329 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 DAW1Q8N136 415 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 MTFR1LQ9H019 292 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 SUGCTQ9HAC7 445 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 AGO4Q9HCK5 861 aaKnown RBP14.66□□□□□ -0.06
VPS33B-202ENST00000535906 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 SEL1LQ9UBV2 794 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
VPS33B-202ENST00000535906 ARHGEF35A5YM69 484 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 TACC1O75410 805 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 UCHL3P15374 230 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 GUCY2CP25092 1073 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 MAPK7Q13164 816 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 MTMR1Q13613 665 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 KLHDC7AQ5VTJ3 777 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 TAF3Q5VWG9 929 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 PRAMEF18Q5VWM3 479 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms