RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 LIG1P18858 919 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 RPA1P27694 616 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 SEMA3FQ13275 785 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 PPP2R2DQ66LE6 453 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 DEFB128Q7Z7B8 93 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 USP38Q8NB14 1042 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 RASSF8Q8NHQ8 419 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 PPP1R13LQ8WUF5 828 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 PPM1EQ8WY54 764 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 EPSTI1Q96J88 318 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 LRRC27Q9C0I9 530 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 GOLPH3LQ9H4A5 285 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 SLC28A3Q9HAS3 691 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 JPH1Q9HDC5 661 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-205ENST00000535900 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 POTEMA6NI47 508 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 A6NJR5 290 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
UBE3B-205ENST00000535900 NR1I2O75469 434 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 ARIH2O95376 493 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 GH1P01241 217 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 ACTN1P12814 892 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 IGFBP4P22692 258 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-205ENST00000535900 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 NFRKBQ6P4R8 1299 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
UBE3B-205ENST00000535900 SEPT14Q6ZU15 432 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-205ENST00000535900 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 CLSTN2Q9H4D0 955 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 DDX41Q9UJV9 622 aaKnown RBP12.05□□□□□ -0.48
UBE3B-205ENST00000535900 YBX2Q9Y2T7 364 aaKnown RBP12.05□□□□□ -0.48
UBE3B-205ENST00000535900 PCDHA10Q9Y5I2 948 aa12.05□□□□□ -0.48
UBE3B-205ENST00000535900 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 LYPLA2O95372 231 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 P4HBP07237 508 aaKnown RBP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 MMP3P08254 477 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 XRCC6P12956 609 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 ATP2A2P16615 1042 aaKnown RBP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 RFC2P35250 354 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 CCT6AP40227 531 aaKnown RBP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 STAT6P42226 847 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 RABGGTBP53611 331 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 AMPD3Q01432 767 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 PTPN11Q06124 597 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 BFSP2Q13515 415 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 LAMC2Q13753 1193 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 E2F4Q16254 413 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 SPECC1Q5M775 1068 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 NCAPH2Q6IBW4 605 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 CNNM3Q8NE01 707 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 AFG1LQ8WV93 481 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 EIF2AK1Q9BQI3 630 aaKnown RBP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 MMTAG2Q9BU76 263 aaKnown RBP12.04□□□□□ -0.48
UBE3B-205ENST00000535900 UNC45AQ9H3U1 944 aa12.04□□□□□ -0.48
UBE3B-205ENST00000535900 ATP9AO75110 1047 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 ATG7O95352 703 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 PSAPP07602 524 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 UBA1P22314 1058 aaKnown RBP12.03□□□□□ -0.48
UBE3B-205ENST00000535900 LY6KQ17RY6 165 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 CELF3Q5SZQ8 465 aaKnown RBP12.03□□□□□ -0.48
UBE3B-205ENST00000535900 MIS18BP1Q6P0N0 1132 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 ATP6V0A1Q93050 837 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 NACC1Q96RE7 527 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 GTPBP4Q9BZE4 634 aaKnown RBP12.03□□□□□ -0.48
UBE3B-205ENST00000535900 TNMDQ9H2S6 317 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 MLXIPQ9HAP2 919 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 THEGQ9P2T0 379 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 DNM3Q9UQ16 869 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 PCDHA11Q9Y5I1 949 aa12.03□□□□□ -0.48
UBE3B-205ENST00000535900 LOXHD1Q8IVV2 1947 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 EML1O00423 815 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 GGPS1O95749 300 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 PLCG1P19174 1290 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 QARSP47897 775 aaKnown RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 PSMC5P62195 406 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 ARHGAP1Q07960 439 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms