RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 USP11P51784 963 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 MGAT3Q09327 533 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 ADGRE1Q14246 886 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 ME3Q16798 604 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 ZNF746Q6NUN9 644 aaPredicted RBP10.02□□□□□ -0.81
CHD4-204ENST00000535810 MIS18BP1Q6P0N0 1132 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 SMAP1Q8IYB5 467 aaPredicted RBP10.02□□□□□ -0.81
CHD4-204ENST00000535810 BLIDQ8IZY5 108 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 IL27Q8NEV9 243 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 TRAPPC12Q8WVT3 735 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 SEPT8Q92599 483 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 GTF3C6Q969F1 213 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 ZNF302Q9NR11 478 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 KCNJ14Q9UNX9 436 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 SIP14410 1827 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 CYP3A7-CYP3A51PA0A087WV96 503 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 LCHNA4D1U4 455 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 ZBTB42B2RXF5 422 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 TLL1O43897 1013 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 TDP2O95551 362 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 RPLP2P05387 115 aaKnown RBP10.01□□□□□ -0.81
CHD4-204ENST00000535810 GHRP10912 638 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 CYP3A7P24462 503 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 NEK4P51957 841 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 KRT76Q01546 638 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 TAP1Q03518 808 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 C8orf34Q49A92 452 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 Q4G0T1 1027 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 FAM160B1Q5W0V3 765 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 SWSAP1Q6NVH7 229 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 PDXDC2PQ6P474 469 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.01□□□□□ -0.811e-7■□□□□ 8.6
CHD4-204ENST00000535810 RSPH3Q86UC2 560 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 NECAB1Q8N987 351 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 DNAJB3Q8WWF6 145 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 APBB2Q92870 758 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 SLC5A5Q92911 643 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 TNPO1Q92973 898 aaKnown RBP10.01□□□□□ -0.81
CHD4-204ENST00000535810 GAS2L1Q99501 681 aaPredicted RBP10.01□□□□□ -0.81
CHD4-204ENST00000535810 PHF20Q9BVI0 1012 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 IFIH1Q9BYX4 1025 aaKnown RBP10.01□□□□□ -0.81
CHD4-204ENST00000535810 FAM49AQ9H0Q0 323 aaPredicted RBP10.01□□□□□ -0.81
CHD4-204ENST00000535810 GJB4Q9NTQ9 266 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 TCEAL9Q9UHQ7 104 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 PCDHA10Q9Y5I2 948 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 IGSF9BQ9UPX0 1349 aa10.01□□□□□ -0.81
CHD4-204ENST00000535810 EPOPA6NHQ4 379 aa10□□□□□ -0.81
CHD4-204ENST00000535810 WDR64B1ANS9 1081 aa10□□□□□ -0.81
CHD4-204ENST00000535810 AMHP03971 560 aa10□□□□□ -0.81
CHD4-204ENST00000535810 PSAPP07602 524 aa10□□□□□ -0.81
CHD4-204ENST00000535810 FDPSP14324 419 aaKnown RBP10□□□□□ -0.81
CHD4-204ENST00000535810 ATP4AP20648 1035 aa10□□□□□ -0.81
CHD4-204ENST00000535810 MRPS6P82932 125 aaKnown RBP10□□□□□ -0.81
CHD4-204ENST00000535810 ST3GAL1Q11201 340 aa10□□□□□ -0.81
CHD4-204ENST00000535810 LPIN1Q14693 890 aa10□□□□□ -0.81
CHD4-204ENST00000535810 NONOQ15233 471 aaKnown RBP eCLIP10□□□□□ -0.81
CHD4-204ENST00000535810 MTHFD1LQ6UB35 978 aa10□□□□□ -0.81
CHD4-204ENST00000535810 KRT25Q7Z3Z0 450 aa10□□□□□ -0.81
CHD4-204ENST00000535810 SPRED2Q7Z698 418 aa10□□□□□ -0.81
CHD4-204ENST00000535810 MYOCDQ8IZQ8 938 aa10□□□□□ -0.81
CHD4-204ENST00000535810 GJA10Q969M2 543 aa10□□□□□ -0.81
CHD4-204ENST00000535810 MBOAT7Q96N66 472 aa10□□□□□ -0.81
CHD4-204ENST00000535810 RIT2Q99578 217 aa10□□□□□ -0.81
CHD4-204ENST00000535810 RAD9AQ99638 391 aa10□□□□□ -0.81
CHD4-204ENST00000535810 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
CHD4-204ENST00000535810 CERS4Q9HA82 394 aa10□□□□□ -0.81
CHD4-204ENST00000535810 ORC3Q9UBD5 711 aaPredicted RBP10□□□□□ -0.81
CHD4-204ENST00000535810 PCDHA2Q9Y5H9 948 aa10□□□□□ -0.81
CHD4-204ENST00000535810 MAFBQ9Y5Q3 323 aaPredicted RBP10□□□□□ -0.81
CHD4-204ENST00000535810 CDY2AQ9Y6F7 541 aa10□□□□□ -0.81
CHD4-204ENST00000535810 PRRC2BQ5JSZ5 2229 aaKnown RBP10□□□□□ -0.81
CHD4-204ENST00000535810 COL1A2P08123 1366 aa10□□□□□ -0.81
CHD4-204ENST00000535810 SMIM35A0A1B0GVV1 85 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.99□□□□□ -0.81
CHD4-204ENST00000535810 CHMP2AO43633 222 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 HBP1O60381 514 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 GAS7O60861 476 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 PSMD10O75832 226 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 XBP1P17861 261 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 TMEM62Q0P6H9 643 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 INF2Q27J81 1249 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 FBXO47Q5MNV8 452 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 LRCH2Q5VUJ6 765 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 FAM117BQ6P1L5 589 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 MOXD1Q6UVY6 613 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 NSUN7Q8NE18 718 aaKnown RBP9.99□□□□□ -0.81
CHD4-204ENST00000535810 ETNPPLQ8TBG4 499 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 ARNTL2Q8WYA1 636 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 WASF1Q92558 559 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 DDX12PQ92771 950 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 SNX27Q96L92 541 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 TEKT3Q9BXF9 490 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 UNC45AQ9H3U1 944 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 AGO3Q9H9G7 860 aaKnown RBP9.99□□□□□ -0.81
CHD4-204ENST00000535810 DISC1Q9NRI5 854 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 GABBR1Q9UBS5 961 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms