RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 ANO5Q75V66 913 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 SLFN12Q8IYM2 578 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 ADAMTS19Q8TE59 1207 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 ATP8B4Q8TF62 1192 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 UHRF1Q96T88 793 aaPredicted RBP14.73□□□□□ -0.05
CHFR-210ENST00000535527 EIF2AK1Q9BQI3 630 aaKnown RBP14.73□□□□□ -0.05
CHFR-210ENST00000535527 LXNQ9BS40 222 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 KATNAL1Q9BW62 490 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 TMEM39AQ9NV64 488 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 SAMM50Q9Y512 469 aa14.73□□□□□ -0.05
CHFR-210ENST00000535527 MBLAC1A4D2B0 266 aaPredicted RBP14.72□□□□□ -0.05
CHFR-210ENST00000535527 SLITRK3O94933 977 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 OATP04181 439 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 SFNP31947 248 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHFR-210ENST00000535527 IGBP1P78318 339 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 CEBPZQ03701 1054 aaKnown RBP14.72□□□□□ -0.05
CHFR-210ENST00000535527 PTPN11Q06124 597 aaPredicted RBP14.72□□□□□ -0.05
CHFR-210ENST00000535527 EPHA7Q15375 998 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 TARBP2Q15633 366 aaKnown RBP14.72□□□□□ -0.05
CHFR-210ENST00000535527 USP49Q70CQ1 688 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 KCNK18Q7Z418 384 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 SERINC5Q86VE9 423 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 LINC01465Q8N7H1 131 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 C7orf31Q8N865 590 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 IGSF22Q8N9C0 903 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 RDM1Q8NG50 284 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 HSD17B14Q9BPX1 270 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 ZNF215Q9UL58 517 aaPredicted RBP14.72□□□□□ -0.05
CHFR-210ENST00000535527 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 MYH11P35749 1972 aa14.72□□□□□ -0.05
CHFR-210ENST00000535527 POTEB3A0JP26 581 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 C17orf102A2RUQ5 167 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 DCDC2CA8MYV0 355 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 C22orf31O95567 290 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 TIMP1P01033 207 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 NPEPPSP55786 919 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
CHFR-210ENST00000535527 DRP2Q13474 957 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 POTEBQ6S5H4 581 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 POTEGQ6S5H5 508 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 SCLYQ96I15 445 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 FBXO2Q9UK22 296 aaPredicted RBP14.71□□□□□ -0.05
CHFR-210ENST00000535527 TRPC6Q9Y210 931 aa14.71□□□□□ -0.05
CHFR-210ENST00000535527 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 MARCKSP29966 332 aaPredicted RBP14.7□□□□□ -0.06
CHFR-210ENST00000535527 PRPHP41219 470 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 NASPP49321 788 aaPredicted RBP14.7□□□□□ -0.06
CHFR-210ENST00000535527 CCL23P55773 120 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 DNM1Q05193 864 aaKnown RBP14.7□□□□□ -0.06
CHFR-210ENST00000535527 RBL2Q08999 1139 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 BECN1Q14457 450 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 FAM160B1Q5W0V3 765 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 C16orf59Q7L2K0 433 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 CATSPER3Q86XQ3 398 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 PPM1EQ8WY54 764 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 ATP6V0A1Q93050 837 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 PNMA5Q96PV4 448 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 TFIP11Q9UBB9 837 aaKnown RBP14.7□□□□□ -0.06
CHFR-210ENST00000535527 TUBE1Q9UJT0 475 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 RBM19Q9Y4C8 960 aaKnown RBP14.7□□□□□ -0.06
CHFR-210ENST00000535527 COL4A6Q14031 1691 aa14.7□□□□□ -0.06
CHFR-210ENST00000535527 NRCAMQ92823 1304 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 VWA3AA6NCI4 1184 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 BAG4O95429 457 aaKnown RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 QARSP47897 775 aaKnown RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 PSMC5P62195 406 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 MGAT3Q09327 533 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 PPIGQ13427 754 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■■□□□ 14
CHFR-210ENST00000535527 ZNF618Q5T7W0 954 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 RASIP1Q5U651 963 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 MFSD5Q6N075 450 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 MTHFD1LQ6UB35 978 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 CLIC6Q96NY7 704 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.69□□□□□ -0.064e-6■■■■□ 25.1
CHFR-210ENST00000535527 PBX4Q9BYU1 374 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 DAXXQ9UER7 740 aaPredicted RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 SEPT9Q9UHD8 586 aaPredicted RBP14.69□□□□□ -0.06
CHFR-210ENST00000535527 COL1A2P08123 1366 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 CHD9Q3L8U1 2897 aa14.69□□□□□ -0.06
CHFR-210ENST00000535527 HBP1O60381 514 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 P4HBP07237 508 aaKnown RBP14.68□□□□□ -0.06
CHFR-210ENST00000535527 CTSHP09668 335 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 CKBP12277 381 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 CSF2RAP15509 400 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 SLC26A2P50443 739 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 CLCN3P51790 818 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 PTK7Q13308 1070 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 GRB10Q13322 594 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 MTERF2Q49AM1 385 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 LRRC71Q8N4P6 559 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 LINC00301Q8NCQ3 95 aa14.68□□□□□ -0.06
CHFR-210ENST00000535527 PIGOQ8TEQ8 1089 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms