RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 ATP4AP20648 1035 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 MKRN4PQ13434 485 aaPredicted RBP21.4■■□□□ 1.02
LRRK1-210ENST00000534045 TRIM29Q14134 588 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 ME3Q16798 604 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 MOXD1Q6UVY6 613 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 KIAA0319LQ8IZA0 1049 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 FIBCD1Q8N539 461 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 COL25A1Q9BXS0 654 aaPredicted RBP21.4■■□□□ 1.02
LRRK1-210ENST00000534045 UNC45AQ9H3U1 944 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 AGO3Q9H9G7 860 aaKnown RBP21.4■■□□□ 1.02
LRRK1-210ENST00000534045 SUGCTQ9HAC7 445 aa21.4■■□□□ 1.02
LRRK1-210ENST00000534045 RPS6KA5O75582 802 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 MRPS5P82675 430 aaKnown RBP21.39■■□□□ 1.01
LRRK1-210ENST00000534045 TJAP1Q5JTD0 557 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 PIK3AP1Q6ZUJ8 805 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 NEK8Q86SG6 692 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 RDM1Q8NG50 284 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 GJA10Q969M2 543 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 MAP7D2Q96T17 732 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 C17orf80Q9BSJ5 609 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 LMCD1Q9NZU5 365 aa21.39■■□□□ 1.01
LRRK1-210ENST00000534045 IGSF9BQ9UPX0 1349 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 KDM3AQ9Y4C1 1321 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 EDIL3O43854 480 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 CCNT1O60563 726 aaKnown RBP21.38■■□□□ 1.01
LRRK1-210ENST00000534045 DTNBO60941 627 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 PSMD10O75832 226 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 SEC24BO95487 1268 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 OATP04181 439 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 STAG3L1P0CL83 205 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 IBSPP21815 317 aaPredicted RBP21.38■■□□□ 1.01
LRRK1-210ENST00000534045 AAK1Q2M2I8 961 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 EFCAB12Q6NXP0 572 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 SPRED2Q7Z698 418 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 SP7Q8TDD2 431 aaPredicted RBP21.38■■□□□ 1.01
LRRK1-210ENST00000534045 GDPD5Q8WTR4 605 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 GTF3C6Q969F1 213 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 RNF216Q9NWF9 866 aaPredicted RBP21.38■■□□□ 1.01
LRRK1-210ENST00000534045 LRFN2Q9ULH4 789 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 AKT3Q9Y243 479 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 CHD9Q3L8U1 2897 aa21.38■■□□□ 1.01
LRRK1-210ENST00000534045 COL4A4P53420 1690 aaPredicted RBP21.37■■□□□ 1.01
LRRK1-210ENST00000534045 GPR182O15218 404 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 CTDNEP1O95476 244 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 C22orf31O95567 290 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 GCFC2P16383 781 aaKnown RBP21.37■■□□□ 1.01
LRRK1-210ENST00000534045 KRT2P35908 639 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 PRKCEQ02156 737 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 NPY5RQ15761 445 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 PTPROQ16827 1216 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 TMEM266Q2M3C6 531 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 KRT40Q6A162 431 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 FAM43BQ6ZT52 329 aaPredicted RBP21.37■■□□□ 1.01
LRRK1-210ENST00000534045 PPP1R16BQ96T49 567 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 GJB4Q9NTQ9 266 aa21.37■■□□□ 1.01
LRRK1-210ENST00000534045 EVPLQ92817 2033 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 DENND3A2RUS2 1198 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 BAG4O95429 457 aaKnown RBP21.36■■□□□ 1.01
LRRK1-210ENST00000534045 CRYBB1P53674 252 aaPredicted RBP21.36■■□□□ 1.01
LRRK1-210ENST00000534045 TBC1D8BQ0IIM8 1120 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 BTG3Q14201 252 aaPredicted RBP21.36■■□□□ 1.01
LRRK1-210ENST00000534045 KIZQ2M2Z5 673 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 EPC2Q52LR7 807 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 PPP4R3AQ6IN85 833 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 TMEM192Q8IY95 271 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 ZNF710Q8N1W2 664 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 FAM20AQ96MK3 541 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 SCLT1Q96NL6 688 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 ASB2Q96Q27 587 aa21.36■■□□□ 1.01
LRRK1-210ENST00000534045 ZBTB42B2RXF5 422 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 LPXNO60711 386 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 DKC1O60832 514 aaKnown RBP eCLIP21.35■■□□□ 1.01
LRRK1-210ENST00000534045 VTNP04004 478 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 XKR3Q5GH77 459 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 OXER1Q8TDS5 423 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 MBOAT7Q96N66 472 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 SEPT9Q9UHD8 586 aaPredicted RBP21.35■■□□□ 1.01
LRRK1-210ENST00000534045 COG5Q9UP83 839 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 LIMCH1Q9UPQ0 1083 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 NOC2LQ9Y3T9 749 aaKnown RBP21.35■■□□□ 1.01
LRRK1-210ENST00000534045 RWDD3Q9Y3V2 267 aa21.35■■□□□ 1.01
LRRK1-210ENST00000534045 DDX11L8A8MPP1 907 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 ZNF862O60290 1169 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 DNM2P50570 870 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 CLCN3P51790 818 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 NLRP11P59045 1033 aaKnown RBP21.34■■□□□ 1.01
LRRK1-210ENST00000534045 GPM6BQ13491 265 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 NPAS4Q8IUM7 802 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 ETNPPLQ8TBG4 499 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 OSMRQ99650 979 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 CDHR5Q9HBB8 845 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 ST3GAL5Q9UNP4 418 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 PCDHB7Q9Y5E2 793 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 NLRC5Q86WI3 1866 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 A0A0C4DFX4 3053 aa21.34■■□□□ 1.01
LRRK1-210ENST00000534045 SLC37A4O43826 429 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 LARGE1O95461 756 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 FDPSP14324 419 aaKnown RBP21.33■■□□□ 1.01
LRRK1-210ENST00000534045 CTNNB1P35222 781 aa21.33■■□□□ 1.01
LRRK1-210ENST00000534045 FOSBP53539 338 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms