RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 CABP7Q86V35 215 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 CAGE1Q8TC20 777 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 LEO1Q8WVC0 666 aaPredicted RBP18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 TRAPPC12Q8WVT3 735 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 CLIC6Q96NY7 704 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 CEP89Q96ST8 783 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 CCSER1Q9C0I3 900 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 NT5C3AQ9H0P0 336 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 CYP26B1Q9NR63 512 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 PRKAG2Q9UGJ0 569 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 DBR1Q9UK59 544 aaKnown RBP18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.53
PACSIN3-210ENST00000533686 SMIM35A0A1B0GVV1 85 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 TRIM43BA6NCK2 446 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 CUTAO60888 179 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 CAND2O75155 1236 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 C22orf31O95567 290 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 BFSP2Q13515 415 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 MTERF2Q49AM1 385 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 POTEGQ6S5H5 508 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 SH3RF1Q7Z6J0 888 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 EXOC8Q8IYI6 725 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 CCDC155Q8N6L0 562 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 DHX38Q92620 1227 aaKnown RBP18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 TRIM43Q96BQ3 446 aaPredicted RBP18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 CEP170P1Q96L14 293 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 NOC4LQ9BVI4 516 aaKnown RBP18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 KIAA1024Q9UPX6 916 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 ALPK3Q96L96 1907 aa18.38■□□□□ 0.53
PACSIN3-210ENST00000533686 TMEM150BA6NC51 233 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 ZBTB39O15060 712 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 NPEPPSP55786 919 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 TBC1D8BQ0IIM8 1120 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 TRIM71Q2Q1W2 868 aaKnown RBP18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 XKR9Q5GH70 373 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 PLA2G4FQ68DD2 849 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 PIGOQ8TEQ8 1089 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 CHAMP1Q96JM3 812 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 JPH2Q9BR39 696 aaPredicted RBP18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 PRDM5Q9NQX1 630 aaPredicted RBP18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 DDX19AQ9NUU7 478 aaKnown RBP18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 PCDHA7Q9UN72 937 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 DNM3Q9UQ16 869 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 WDR81Q562E7 1941 aa18.37■□□□□ 0.53
PACSIN3-210ENST00000533686 IGKV6-21A0A0C4DH24 114 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 MAFO75444 373 aaPredicted RBP18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 TIMP1P01033 207 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 RFC5P40937 340 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 ME1P48163 572 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 RARRES1P49788 294 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 GRB10Q13322 594 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 TMEM119Q4V9L6 283 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 NME8Q8N427 588 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 LINC01465Q8N7H1 131 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 RETREG2Q8NC44 543 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 SYMPKQ92797 1274 aaKnown RBP18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 WNT8BQ93098 351 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 EPSTI1Q96J88 318 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 CDK5RAP3Q96JB5 506 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 PNMA5Q96PV4 448 aa18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 DHX33Q9H6R0 707 aaKnown RBP18.36■□□□□ 0.53
PACSIN3-210ENST00000533686 EYA4O95677 639 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 RAG1P15918 1043 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 TMOD1P28289 359 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 TXLNAP40222 546 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 SPECC1Q5M775 1068 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 RSPH3Q86UC2 560 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 SH2D3AQ9BRG2 576 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
PACSIN3-210ENST00000533686 KAT6AQ92794 2004 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 A0A087WWV3 80 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 GAS2O43903 313 aaKnown RBP18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 DGAT1O75907 488 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 CKBP12277 381 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 ZRSR1Q15695 479 aaKnown RBP18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 EFCAB12Q6NXP0 572 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 KIAA0319LQ8IZA0 1049 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 ZNF710Q8N1W2 664 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 SLC7A3Q8WY07 619 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 ZBTB10Q96DT7 871 aa18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 CCDC43Q96MW1 224 aaKnown RBP18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 ZMYND8Q9ULU4 1186 aaPredicted RBP18.34■□□□□ 0.53
PACSIN3-210ENST00000533686 ARHGEF35A5YM69 484 aa18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 E9PMD0 336 aa18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 PARNO95453 639 aaKnown RBP18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 SELPP16109 830 aa18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 ITGB8P26012 769 aa18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 THPOP40225 353 aa18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 KARSQ15046 597 aaKnown RBP18.33■□□□□ 0.52
PACSIN3-210ENST00000533686 FAM26DQ5JW98 314 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms