RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 PLA2G4BP0C869 781 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 CAPN2P17655 700 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 RARRES1P49788 294 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 TARBP2Q15633 366 aaKnown RBP13.29□□□□□ -0.28
COMMD9-208ENST00000533643 XKR9Q5GH70 373 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 SYT2Q8N9I0 419 aaPredicted RBP13.29□□□□□ -0.28
COMMD9-208ENST00000533643 ANKLE1Q8NAG6 615 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 GPT2Q8TD30 523 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 TRAPPC12Q8WVT3 735 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 GLT1D1Q96MS3 346 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 SH2D3AQ9BRG2 576 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 CUEDC2Q9H467 287 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 USP25Q9UHP3 1055 aa13.29□□□□□ -0.28
COMMD9-208ENST00000533643 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 SSBP05455 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
COMMD9-208ENST00000533643 COL6A1P12109 1028 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 EN2P19622 333 aaPredicted RBP13.28□□□□□ -0.28
COMMD9-208ENST00000533643 HOXC8P31273 242 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 PPFIA1Q13136 1202 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 ITGA7Q13683 1181 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 HIC1Q14526 733 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
COMMD9-208ENST00000533643 GRIK4Q16099 956 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 DIS3LQ8TF46 1054 aaKnown RBP13.28□□□□□ -0.28
COMMD9-208ENST00000533643 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
COMMD9-208ENST00000533643 ABHD8Q96I13 439 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 SETD4Q9NVD3 440 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 DACT1Q9NYF0 836 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 BRCA2P51587 3418 aa13.28□□□□□ -0.28
COMMD9-208ENST00000533643 WDR81Q562E7 1941 aa13.27□□□□□ -0.28
COMMD9-208ENST00000533643 RRN3P2A6NIE6 340 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 IGBP1P78318 339 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 NFKBIBQ15653 356 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 ARSHQ5FYA8 562 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 MARCH8Q5T0T0 291 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 PADI6Q6TGC4 694 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 KRBA2Q6ZNG9 492 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 SV2BQ7L1I2 683 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 SESTD1Q86VW0 696 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 CEP57L1Q8IYX8 460 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 C7orf31Q8N865 590 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 LMBR1Q8WVP7 490 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 STAMQ92783 540 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 PAGE5Q96GU1 130 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 TIGD1Q96MW7 591 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 MTRQ99707 1265 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 RUSC1Q9BVN2 902 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 SENP6Q9GZR1 1112 aaPredicted RBP13.27□□□□□ -0.29
COMMD9-208ENST00000533643 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 PDLIM7Q9NR12 457 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 KBTBD4Q9NVX7 518 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 COL1A2P08123 1366 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 SCN10AQ9Y5Y9 1956 aa13.27□□□□□ -0.29
COMMD9-208ENST00000533643 A0A0U1RQG5 324 aaPredicted RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 MYMKA6NI61 221 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 MAFO75444 373 aaPredicted RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 C22orf31O95567 290 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 CYP11B2P19099 503 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 PTMSP20962 102 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 MYH9P35579 1960 aaKnown RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 CDK7P50613 346 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 ADAM17P78536 824 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 PTPN11Q06124 597 aaPredicted RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 RINT1Q6NUQ1 792 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 C1orf186Q6ZWK4 172 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 GRAMD1CQ8IYS0 662 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 NRCAMQ92823 1304 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 ZBTB10Q96DT7 871 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 PAWRQ96IZ0 340 aaKnown RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
COMMD9-208ENST00000533643 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
COMMD9-208ENST00000533643 KIAA0100Q14667 2235 aaKnown RBP13.25□□□□□ -0.29
COMMD9-208ENST00000533643 IGKV6-21A0A0C4DH24 114 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 NPHP3-ACAD11A0A0J9YXS1 232 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 C17orf102A2RUQ5 167 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 MBLAC1A4D2B0 266 aaPredicted RBP13.25□□□□□ -0.29
COMMD9-208ENST00000533643 ARVCFO00192 962 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
COMMD9-208ENST00000533643 MBD3O95983 291 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 KLRC1P26715 233 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 RFC5P40937 340 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 AFMP43652 599 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms