RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 NUDT10Q8NFP7 164 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 CXorf38Q8TB03 319 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 ERCC4Q92889 916 aaPredicted RBP3.9□□□□□ -1.79
ATM-220ENST00000533526 RELTQ969Z4 430 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 NUDT11Q96G61 164 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 C20orf173Q96LM9 149 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 FOXB1Q99853 325 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 AMNQ9BXJ7 453 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 CARD11Q9BXL7 1154 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 KATNBL1Q9H079 304 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 OR10A5Q9H207 317 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 OXSMQ9NWU1 459 aa3.9□□□□□ -1.79
ATM-220ENST00000533526 SLC9A1P19634 815 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 MC4RP32245 332 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 CNR2P34972 360 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 PPP2CBP62714 309 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 PPP2CAP67775 309 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 IL13RA1P78552 427 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 ROM1Q03395 351 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 TOP3AQ13472 1001 aaPredicted RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 LRRC32Q14392 662 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 ZMAT1Q5H9K5 638 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 TTC38Q5R3I4 469 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 GPR158Q5T848 1215 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 EGFLAMQ63HQ2 1017 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 GRAMD4Q6IC98 578 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 FSTL4Q6MZW2 842 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 TIGD7Q6NT04 549 aaPredicted RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 RTN4RL1Q86UN2 441 aaPredicted RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 C11orf74Q86VG3 221 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 KBTBD2Q8IY47 623 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 NXPE1Q8N323 547 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 LEO1Q8WVC0 666 aaPredicted RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 FOXRED1Q96CU9 486 aaPredicted RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 MBD6Q96DN6 1003 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 MAML3Q96JK9 1138 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 C16orf92Q96LL3 132 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 ELF4Q99607 663 aaPredicted RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 ZDHHC5Q9C0B5 715 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 CAAP1Q9H8G2 361 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 TOMM22Q9NS69 142 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 CNOT11Q9UKZ1 510 aaKnown RBP3.89□□□□□ -1.79
ATM-220ENST00000533526 INVSQ9Y283 1065 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 PRKAB1Q9Y478 270 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 ADAMTS20P59510 1910 aa3.89□□□□□ -1.79
ATM-220ENST00000533526 A0A0G2JLL6 359 aaPredicted RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 A0A0G2JNJ9 132 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 UBA6A0AVT1 1052 aaPredicted RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 ZEB2O60315 1214 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 B4GALT4O60513 344 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 PLATP00750 562 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 CPEP16870 476 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 CD40P25942 277 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 SOX5P35711 763 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 ETV4P43268 484 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 LSSP48449 732 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 MASP1P48740 699 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 BCAR1P56945 870 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 IL2P60568 153 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 CD83Q01151 205 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 MOGSQ13724 837 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 USP10Q14694 798 aaKnown RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 EIF4HQ15056 248 aaKnown RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 DHCR24Q15392 516 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 ZNF568Q3ZCX4 644 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 KANK2Q63ZY3 851 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 ARHGEF18Q6ZSZ5 1173 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 OTOP2Q7RTS6 562 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 RALYLQ86SE5 291 aaKnown RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 PHYKPLQ8IUZ5 450 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 SMC1BQ8NDV3 1235 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 CHTF18Q8WVB6 975 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 RPGRQ92834 1020 aaKnown RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 TUBGCP5Q96RT8 1024 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 THG1LQ9NWX6 298 aaKnown RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 USP36Q9P275 1121 aaKnown RBP3.88□□□□□ -1.79
ATM-220ENST00000533526 Q9UFV3 132 aa3.88□□□□□ -1.79
ATM-220ENST00000533526 ZNF891A8MT65 544 aaPredicted RBP3.87□□□□□ -1.79
ATM-220ENST00000533526 LAMTOR5O43504 91 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 B4GALT3O60512 393 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 FOXD2O60548 495 aaPredicted RBP3.87□□□□□ -1.79
ATM-220ENST00000533526 FKBP9O95302 570 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 PRLP01236 227 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 HMGCRP04035 888 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 SYN1P17600 705 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 PTX3P26022 381 aaPredicted RBP3.87□□□□□ -1.79
ATM-220ENST00000533526 CSF2RBP32927 897 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 LSP1P33241 339 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 STAT3P40763 770 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 SESN2P58004 480 aaPredicted RBP3.87□□□□□ -1.79
ATM-220ENST00000533526 SLC6A3Q01959 620 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 CREB3L3Q68CJ9 461 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 TMEM200BQ69YZ2 307 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 SLFN12LQ6IEE8 588 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 LRSAM1Q6UWE0 723 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 FKBP9P1Q75LS8 142 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 RNF180Q86T96 592 aa3.87□□□□□ -1.79
ATM-220ENST00000533526 FERMT3Q86UX7 667 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms