RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TYW1Q9NV66 732 aaKnown RBP18.13■□□□□ 0.49
CTSB-228ENST00000533455 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 LY75O60449 1722 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 NCANO14594 1321 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 GMNCA6NCL1 334 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 H0YHG0 523 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 TBX3O15119 743 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 TRAPPC3O43617 180 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 FERP16591 822 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 SLC16A2P36021 539 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 PPP2R2AP63151 447 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 TMC3Q7Z5M5 1100 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 ETNPPLQ8TBG4 499 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 CRYGNQ8WXF5 182 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 AJAP1Q9UKB5 411 aaPredicted RBP18.12■□□□□ 0.49
CTSB-228ENST00000533455 ASTN1O14525 1302 aa18.12■□□□□ 0.49
CTSB-228ENST00000533455 C5orf60A6NFR6 353 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 TMCO5BA8MYB1 307 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 DDX3XO00571 662 aaKnown RBP eCLIP18.11■□□□□ 0.498e-12■■■■■ 32.2
CTSB-228ENST00000533455 AKAP3O75969 853 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 SHMT1P34896 483 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 RFC4P35249 363 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 POU5F1Q01860 360 aaKnown RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 AP3B2Q13367 1082 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 PICALMQ13492 652 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 PTF1AQ7RTS3 328 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 CATSPER3Q86XQ3 398 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 ERMNQ8TAM6 284 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 SLC35C1Q96A29 364 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 REEP2Q9BRK0 252 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 A1CFQ9NQ94 594 aaKnown RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 SERPINB13Q9UIV8 391 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 STK24Q9Y6E0 443 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L15C9J2P7 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L13C9JLJ4 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L11C9JVI0 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L18D6R9N7 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L22D6RA61 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L17D6RBQ6 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L19D6RCP7 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L20D6RJB6 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 DAPK3O43293 454 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 NR3C1P04150 777 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 ITGA4P13612 1032 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 RPL13P26373 211 aaKnown RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 RPA1P27694 616 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 MNAT1P51948 309 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L24Q0WX57 530 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 USP17L6PQ6QN14 398 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 OLIG1Q8TAK6 271 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 UBLCP1Q8WVY7 318 aaPredicted RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 RPGRQ92834 1020 aaKnown RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 CENPHQ9H3R5 247 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 ACTR5Q9H9F9 607 aaPredicted RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 PPANQ9NQ55 473 aaKnown RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 GEMIN8Q9NWZ8 242 aaKnown RBP18.11■□□□□ 0.49
CTSB-228ENST00000533455 AMACRQ9UHK6 382 aa18.11■□□□□ 0.49
CTSB-228ENST00000533455 SPATA31C1P0DKV0 1188 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 FLT3P36888 993 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 SMTNP53814 917 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 IFT88Q13099 833 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 QRICH1Q2TAL8 776 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 CRY2Q49AN0 593 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 DCAF17Q5H9S7 520 aaPredicted RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 RNF187Q5TA31 235 aaPredicted RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 KCTD1Q719H9 257 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 SLC30A5Q8TAD4 765 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 NCAPGQ9BPX3 1015 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 DDX4Q9NQI0 724 aaKnown RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 GCNT4Q9P109 453 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 DNM3Q9UQ16 869 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 DIS3Q9Y2L1 958 aaKnown RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 F8VZ95 297 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 IRX3P78415 501 aaPredicted RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 Q4G0T1 1027 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 ARMC9Q7Z3E5 817 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 CCDC91Q7Z6B0 441 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 DAAM2Q86T65 1068 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 DNAAF5Q86Y56 855 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 TXLNGYQ9BZA5 131 aa18.1■□□□□ 0.49
CTSB-228ENST00000533455 CCNL1Q9UK58 526 aaPredicted RBP18.1■□□□□ 0.49
CTSB-228ENST00000533455 TTI1O43156 1089 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 STAT1P42224 750 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 PSMC6P62333 389 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.494e-12■■■■■ 77.3
CTSB-228ENST00000533455 CCDC13Q8IYE1 715 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 LNX1Q8TBB1 728 aaPredicted RBP18.09■□□□□ 0.49
CTSB-228ENST00000533455 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
CTSB-228ENST00000533455 UIMC1Q96RL1 719 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
CTSB-228ENST00000533455 DDX20Q9UHI6 824 aaKnown RBP18.09■□□□□ 0.49
CTSB-228ENST00000533455 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 SUGT1Q9Y2Z0 365 aa18.09■□□□□ 0.49
CTSB-228ENST00000533455 UTP11Q9Y3A2 253 aaKnown RBP18.09■□□□□ 0.49
CTSB-228ENST00000533455 PPFIA2O75334 1257 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 RASSF9O75901 435 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 GALCP54803 685 aa18.08■□□□□ 0.49
CTSB-228ENST00000533455 ARHGAP4P98171 946 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms