RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SMC2O95347 1197 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 MLLT1Q03111 559 aaPredicted RBP15.69■□□□□ 0.1
HIF3A-215ENST00000533145 CUL4BQ13620 913 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 PLCB4Q15147 1175 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 FSCN1Q16658 493 aaKnown RBP15.69■□□□□ 0.1
HIF3A-215ENST00000533145 LHX8Q68G74 356 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 DDX12PQ92771 950 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 LENG1Q96BZ8 264 aaPredicted RBP15.69■□□□□ 0.1
HIF3A-215ENST00000533145 DNAJC19Q96DA6 116 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 TIPINQ9BVW5 301 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 PDLIM7Q9NR12 457 aa15.69■□□□□ 0.1
HIF3A-215ENST00000533145 ZNF215Q9UL58 517 aaPredicted RBP15.69■□□□□ 0.1
HIF3A-215ENST00000533145 H3BRB1 525 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 HAS3O00219 553 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 KLRC4O43908 158 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 ZEB2O60315 1214 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 F2P00734 622 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 GIT2Q14161 759 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
HIF3A-215ENST00000533145 KCNB1Q14721 858 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 SLC9C1Q4G0N8 1177 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-215ENST00000533145 GPBP1Q86WP2 473 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 TRIM50Q86XT4 487 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 CKAP2LQ8IYA6 745 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 EXOC8Q8IYI6 725 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 SH3TC2Q8TF17 1288 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 SMARCE1Q969G3 411 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 CEP170P1Q96L14 293 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 RNPEPQ9H4A4 650 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 TUT1Q9H6E5 874 aaKnown RBP15.68■□□□□ 0.1
HIF3A-215ENST00000533145 XPNPEP3Q9NQH7 507 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 CYP26B1Q9NR63 512 aa15.68■□□□□ 0.1
HIF3A-215ENST00000533145 SCN10AQ9Y5Y9 1956 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 COL1A2P08123 1366 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 FRMD3A2A2Y4 597 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 DGAT1O75907 488 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 RPN1P04843 607 aaKnown RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 SSBP05455 408 aaKnown RBP eCLIP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 C6orf222P0C671 652 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 CASP1P29466 404 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 NPEPPSP55786 919 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 ZNF445P59923 1031 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 IRX5P78411 483 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 PURAQ00577 322 aaKnown RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 ZNF484Q5JVG2 852 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 GNASQ5JWF2 1037 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 KAT2BQ92831 832 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 FUCA2Q9BTY2 467 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 GTPBP4Q9BZE4 634 aaKnown RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 BLZF1Q9H2G9 400 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 DHX33Q9H6R0 707 aaKnown RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 PAK6Q9NQU5 681 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 SEPT9Q9UHD8 586 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-215ENST00000533145 ODF2LQ9ULJ1 636 aa15.67■□□□□ 0.1
HIF3A-215ENST00000533145 TMEM150BA6NC51 233 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 MYADML2A6NDP7 307 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 RHOBTB3O94955 611 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 PGK1P00558 417 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 BEX3Q00994 111 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 EHHADHQ08426 723 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 PLA2G4FQ68DD2 849 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 PCSK9Q8NBP7 692 aaKnown RBP15.66■□□□□ 0.1
HIF3A-215ENST00000533145 ERCC4Q92889 916 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-215ENST00000533145 TSEN34Q9BSV6 310 aaKnown RBP15.66■□□□□ 0.1
HIF3A-215ENST00000533145 KATNAL1Q9BW62 490 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
HIF3A-215ENST00000533145 EVPLQ92817 2033 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-215ENST00000533145 IGKV6-21A0A0C4DH24 114 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 SYCE3A1L190 88 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 ZBTB42B2RXF5 422 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MYL3P08590 195 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 ZNF286BP0CG31 522 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MARK3P27448 753 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 RFC5P40937 340 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 ZNF131P52739 623 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 ASIC1P78348 528 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 PSMD2Q13200 908 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MORC3Q14149 939 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MTERF2Q49AM1 385 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 DYMQ7RTS9 669 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 RNF180Q86T96 592 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MCPH1Q8NEM0 835 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 CCDC47Q96A33 483 aaKnown RBP15.65■□□□□ 0.1
HIF3A-215ENST00000533145 ARMC5Q96C12 935 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 CCDC43Q96MW1 224 aaKnown RBP15.65■□□□□ 0.1
HIF3A-215ENST00000533145 REEP2Q9BRK0 252 aa15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MTG1Q9BT17 334 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-215ENST00000533145 GZF1Q9H116 711 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-215ENST00000533145 MAN1B1Q9UKM7 699 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms