RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RASGRP2Q7LDG7 609 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 NFU1Q9UMS0 254 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 MRPS25P82663 173 aaKnown RBP16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 ATP11AP98196 1134 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 TERF2Q15554 542 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 OSBPL9Q96SU4 736 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 EPC1Q9H2F5 836 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
PCDHA3-202ENST00000532566 COL5A2P05997 1499 aaPredicted RBP16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 TCRBV5S4A2TA0A5A2 114 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 EYA4O95677 639 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 GCLMP48507 274 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 CCNA1P78396 465 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 CUL1Q13616 776 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 PDXDC1Q6P996 788 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 FMO2Q99518 471 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 MYMKA6NI61 221 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 FGGP02679 453 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 CAPN12Q6ZSI9 719 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 LXNQ9BS40 222 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 NNTQ13423 1086 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 HAUS1Q96CS2 278 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 SLFN12LQ6IEE8 588 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 RAD9BQ6WBX8 426 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 INTS9Q9NV88 658 aaKnown RBP16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 SERPINA10Q9UK55 444 aa16.55■□□□□ 0.24
PCDHA3-202ENST00000532566 MIF4GDA9UHW6 222 aaKnown RBP16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 PDXKO00764 312 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 DR1Q01658 176 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 SIGLEC1Q9BZZ2 1709 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 IFT172Q9UG01 1749 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 I3L4J1 428 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 SNX1Q13596 522 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 EPHA7Q15375 998 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 NFRKBQ6P4R8 1299 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 FRMD5Q7Z6J6 570 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 STMN2Q93045 179 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 KLHL14Q9P2G3 628 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 CAPN7Q9Y6W3 813 aa16.54■□□□□ 0.24
PCDHA3-202ENST00000532566 BCL9O00512 1426 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 TBX3O15119 743 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 GYPCP04921 128 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 SFNP31947 248 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 SARNPP82979 210 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 TAF12Q16514 161 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 LDHDQ86WU2 507 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 ADAM21Q9UKJ8 722 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 SLC16A4O15374 487 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 ENTPD3O75355 529 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 ZNF131P52739 623 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 SPP2Q13103 211 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 ANKRD20A3Q5VUR7 823 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 PPFIBP2Q8ND30 876 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 CCDC97Q96F63 343 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 RGL1Q9NZL6 768 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 GOLGA8SH3BPF8 625 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 RWDD2BP57060 319 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 DRAP1Q14919 205 aaPredicted RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 CCDC125Q86Z20 511 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 CCDC110Q8TBZ0 833 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 AKT3Q9Y243 479 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 DIS3Q9Y2L1 958 aaKnown RBP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 TROVE2P10155 538 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 HSPA1LP34931 641 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 SLMAPQ14BN4 828 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 NYAP1Q6ZVC0 841 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 AGPAT5Q9NUQ2 364 aa16.53■□□□□ 0.24
PCDHA3-202ENST00000532566 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 SNRNP48Q6IEG0 339 aaKnown RBP16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 CCDC62Q6P9F0 684 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 IL17RAQ96F46 866 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 WRNIP1Q96S55 665 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 TUFT1Q9NNX1 390 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 CHRNA5P30532 468 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 SURF1Q15526 300 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 ADGRA1Q86SQ6 560 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 GABPB2Q8TAK5 448 aaPredicted RBP16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 RSRC1Q96IZ7 334 aaKnown RBP16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 ATP6V0A4Q9HBG4 840 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms