RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CST5P28325 142 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 CCND2P30279 289 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 ADCY7P51828 1080 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 ACLYP53396 1101 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 AK2P54819 239 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 NKX3-2P78367 333 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 STK3Q13188 491 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 RAB33AQ14088 237 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 TTLL4Q14679 1199 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 PGM5Q15124 567 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 KCNA10Q16322 511 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 FSCN1Q16658 493 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 DUSP28Q4G0W2 176 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 TMEM63BQ5T3F8 832 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 CPLX2Q6PUV4 134 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 USP17L6PQ6QN14 398 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 SEPT14Q6ZU15 432 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 VSIG10LQ86VR7 867 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 TRIM22Q8IYM9 498 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 ZNF713Q8N859 430 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 PCSK9Q8NBP7 692 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 KLHDC9Q8NEP7 349 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 PHKBQ93100 1093 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 IL17RAQ96F46 866 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 GLT1D1Q96MS3 346 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 PDCD2LQ9BRP1 358 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 TSEN34Q9BSV6 310 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 UPF3AQ9H1J1 476 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 ALDH8A1Q9H2A2 487 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 C12orf49Q9H741 205 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 UPF2Q9HAU5 1272 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 NCOA5Q9HCD5 579 aaKnown RBP6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 BARHL2Q9NY43 387 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 Q9Y3F1 56 aa6.6□□□□□ -1.35
HMGB1P42-201ENST00000532126 A0A1W2PQ45 241 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 A0A1W2PQY0 241 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 POTEB3A0JP26 581 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 SMCO2A6NFE2 343 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 SPDYE3A6NKU9 549 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 H0YGN5 161 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 STXBP3O00186 592 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 EIF1AYO14602 144 aaKnown RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 NKRFO15226 690 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 CTAGE5O15320 804 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 ZEB2O60315 1214 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 PPFIA3O75145 1194 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 CDKL5O76039 1030 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 ASGR1P07306 291 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 IFNAR1P17181 557 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 PTGS1P23219 599 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 CPT1AP50416 773 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 NEK4P51957 841 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 BEX3Q00994 111 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 SSRP1Q08945 709 aaKnown RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 UBE2SQ16763 222 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 LRRC26Q2I0M4 334 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 GNPTABQ3T906 1256 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 C4orf46Q504U0 113 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 BRDTQ58F21 947 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 COX20Q5RI15 118 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 KCNV1Q6PIU1 500 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 POTEBQ6S5H4 581 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 SLC39A5Q6ZMH5 540 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 ERMP1Q7Z2K6 904 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 OR6J1Q8NGC5 347 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 IL31RAQ8NI17 732 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 CCDC12Q8WUD4 166 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 SLC26A6Q9BXS9 759 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 RNF26Q9BY78 433 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 C22orf23Q9BZE7 217 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 GLT8D2Q9H1C3 349 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 RIC8AQ9NPQ8 531 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 STARD7Q9NQZ5 370 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 TPCN1Q9ULQ1 816 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 COMMD10Q9Y6G5 202 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 KIAA0100Q14667 2235 aaKnown RBP6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 BRCA2P51587 3418 aa6.59□□□□□ -1.35
HMGB1P42-201ENST00000532126 PLXNA1Q9UIW2 1896 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 ELP1O95163 1332 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 FRMPD4Q14CM0 1322 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 PFKFB2O60825 505 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 STAM2O75886 525 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 CABYRO75952 493 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 RGS20O76081 388 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 ARIH2O95376 493 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 FOSP01100 380 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 GH1P01241 217 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 RPLP1P05386 114 aaKnown RBP6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 TGFB3P10600 412 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 GYS2P54840 703 aa6.58□□□□□ -1.36
HMGB1P42-201ENST00000532126 RTP1P59025 263 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms