RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 CABP7Q86V35 215 aa24.9■■□□□ 1.58
LRRK1-208ENST00000532029 CDK5RAP3Q96JB5 506 aa24.9■■□□□ 1.58
LRRK1-208ENST00000532029 CEP170P1Q96L14 293 aa24.9■■□□□ 1.58
LRRK1-208ENST00000532029 HIPK3Q9H422 1215 aa24.9■■□□□ 1.58
LRRK1-208ENST00000532029 ANKEF1Q9NU02 776 aa24.9■■□□□ 1.58
LRRK1-208ENST00000532029 KIAA1024Q9UPX6 916 aa24.9■■□□□ 1.58
LRRK1-208ENST00000532029 TRIM43BA6NCK2 446 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 ZBTB42B2RXF5 422 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 MAGEB2O15479 319 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 XRCC6P12956 609 aaKnown RBP eCLIP24.89■■□□□ 1.58
LRRK1-208ENST00000532029 TBC1D8BQ0IIM8 1120 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 TARBP2Q15633 366 aaKnown RBP24.89■■□□□ 1.58
LRRK1-208ENST00000532029 XKR9Q5GH70 373 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 RASSF8Q8NHQ8 419 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 CAGE1Q8TC20 777 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 TRIM43Q96BQ3 446 aaPredicted RBP24.89■■□□□ 1.58
LRRK1-208ENST00000532029 CALML4Q96GE6 196 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 SPATA32Q96LK8 384 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 CLIC6Q96NY7 704 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 MMTAG2Q9BU76 263 aaKnown RBP24.89■■□□□ 1.58
LRRK1-208ENST00000532029 PPP1R12CQ9BZL4 782 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 CYP26B1Q9NR63 512 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 RCOR1Q9UKL0 485 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 PPME1Q9Y570 386 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 PCDHA2Q9Y5H9 948 aa24.89■■□□□ 1.58
LRRK1-208ENST00000532029 ZBTB39O15060 712 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 SLC26A4O43511 780 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 C22orf31O95567 290 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 SYN1P17600 705 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 TXLNAP40222 546 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 ME1P48163 572 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 NPEPPSP55786 919 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 RUFY4Q6ZNE9 571 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 RSPH3Q86UC2 560 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 RETREG2Q8NC44 543 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 PIGOQ8TEQ8 1089 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 DHX38Q92620 1227 aaKnown RBP24.88■■□□□ 1.57
LRRK1-208ENST00000532029 ZBTB10Q96DT7 871 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 CHAMP1Q96JM3 812 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 SH2D3AQ9BRG2 576 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 NOC4LQ9BVI4 516 aaKnown RBP24.88■■□□□ 1.57
LRRK1-208ENST00000532029 SCAND2PQ9GZW5 306 aaPredicted RBP24.88■■□□□ 1.57
LRRK1-208ENST00000532029 NT5C3AQ9H0P0 336 aa24.88■■□□□ 1.57
LRRK1-208ENST00000532029 DDX19AQ9NUU7 478 aaKnown RBP24.88■■□□□ 1.57
LRRK1-208ENST00000532029 MKI67P46013 3256 aaKnown RBP24.87■■□□□ 1.57
LRRK1-208ENST00000532029 KAT6AQ92794 2004 aa24.87■■□□□ 1.57
LRRK1-208ENST00000532029 CUTAO60888 179 aa24.87■■□□□ 1.57
LRRK1-208ENST00000532029 ECM1Q16610 540 aa24.87■■□□□ 1.57
LRRK1-208ENST00000532029 EXOC8Q8IYI6 725 aa24.87■■□□□ 1.57
LRRK1-208ENST00000532029 LEO1Q8WVC0 666 aaPredicted RBP24.87■■□□□ 1.57
LRRK1-208ENST00000532029 JPH2Q9BR39 696 aaPredicted RBP24.87■■□□□ 1.57
LRRK1-208ENST00000532029 A0A087WWV3 80 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 SMIM35A0A1B0GVV1 85 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 TIMP1P01033 207 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 RPLP2P05387 115 aaKnown RBP24.86■■□□□ 1.57
LRRK1-208ENST00000532029 THPOP40225 353 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 SPECC1Q5M775 1068 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 HYIQ5T013 277 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 METTL13Q8N6R0 699 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 SYMPKQ92797 1274 aaKnown RBP24.86■■□□□ 1.57
LRRK1-208ENST00000532029 WNT8BQ93098 351 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 FAM49AQ9H0Q0 323 aaPredicted RBP24.86■■□□□ 1.57
LRRK1-208ENST00000532029 DBR1Q9UK59 544 aaKnown RBP24.86■■□□□ 1.57
LRRK1-208ENST00000532029 DNM3Q9UQ16 869 aa24.86■■□□□ 1.57
LRRK1-208ENST00000532029 PITPNM1O00562 1244 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 CAND2O75155 1236 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 TMOD1P28289 359 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 CYP2C18P33260 490 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 RFC5P40937 340 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 POLGP54098 1239 aaPredicted RBP24.85■■□□□ 1.57
LRRK1-208ENST00000532029 TRIM71Q2Q1W2 868 aaKnown RBP24.85■■□□□ 1.57
LRRK1-208ENST00000532029 EFCAB12Q6NXP0 572 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 KCTD17Q8N5Z5 321 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 ZNF579Q8NAF0 562 aaKnown RBP24.85■■□□□ 1.57
LRRK1-208ENST00000532029 DNAJB3Q8WWF6 145 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 SLC7A3Q8WY07 619 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 EPSTI1Q96J88 318 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 PNMA5Q96PV4 448 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 PLIN2Q99541 437 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 CCSER1Q9C0I3 900 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 SUGCTQ9HAC7 445 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 CCDC39Q9UFE4 941 aa24.85■■□□□ 1.57
LRRK1-208ENST00000532029 ARHGEF35A5YM69 484 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 CKBP12277 381 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 RARRES1P49788 294 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 RBL2Q08999 1139 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 GRB10Q13322 594 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 CEP89Q96ST8 783 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 MAP7D2Q96T17 732 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 LBHD1Q9BQE6 289 aaPredicted RBP24.84■■□□□ 1.57
LRRK1-208ENST00000532029 PCDHA7Q9UN72 937 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 UMODL1Q5DID0 1318 aa24.84■■□□□ 1.57
LRRK1-208ENST00000532029 H0YGN5 161 aa24.83■■□□□ 1.57
LRRK1-208ENST00000532029 MAFO75444 373 aaPredicted RBP24.83■■□□□ 1.57
LRRK1-208ENST00000532029 SELPP16109 830 aa24.83■■□□□ 1.57
LRRK1-208ENST00000532029 CCL23P55773 120 aa24.83■■□□□ 1.57
LRRK1-208ENST00000532029 KARSQ15046 597 aaKnown RBP24.83■■□□□ 1.57
LRRK1-208ENST00000532029 TMEM119Q4V9L6 283 aa24.83■■□□□ 1.57
LRRK1-208ENST00000532029 PRPF38BQ5VTL8 546 aaKnown RBP24.83■■□□□ 1.57
LRRK1-208ENST00000532029 USP49Q70CQ1 688 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms