RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
GPATCH4-216ENST00000531900 ABHD14A-ACY1A0A1B0GW23 586 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 KIF28PB7ZC32 967 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 EML1O00423 815 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 MAGEB2O15479 319 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 NEMFO60524 1076 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 DKC1O60832 514 aaKnown RBP eCLIP12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 C22orf31O95567 290 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 OATP04181 439 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 P4HBP07237 508 aaKnown RBP12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 KLRC1P26715 233 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 PSMC5P62195 406 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 CALCRLQ16602 461 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 XKR3Q5GH77 459 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 KIAA0319LQ8IZA0 1049 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 LINC01465Q8N7H1 131 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 HSD17B14Q9BPX1 270 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 PRDM12Q9H4Q4 367 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
GPATCH4-216ENST00000531900 PTPRSQ13332 1948 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 PRUNE2Q8WUY3 3088 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 TTC3P53804 2025 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 EYSQ5T1H1 3165 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 GBF1Q92538 1859 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 IGKV6-21A0A0C4DH24 114 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 CHMP2AO43633 222 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 LYPLA2O95372 231 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 TOB1P50616 345 aaPredicted RBP12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 RABGGTBP53611 331 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 IGBP1P78318 339 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 PRKCEQ02156 737 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 UGCGQ16739 394 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 IER5Q5VY09 327 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 C4orf19Q8IY42 314 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 USP38Q8NB14 1042 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 TRAPPC12Q8WVT3 735 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 DNAJB3Q8WWF6 145 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 APBB2Q92870 758 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 TMEM60Q9H2L4 133 aa12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 YBX2Q9Y2T7 364 aaKnown RBP12.15□□□□□ -0.46
GPATCH4-216ENST00000531900 SLITRK3O94933 977 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 IGFBP4P22692 258 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 KCNJ6P48051 423 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 FOSBP53539 338 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 MRPS6P82932 125 aaKnown RBP12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 IKBKEQ14164 716 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 RILPL1Q5EBL4 403 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 FBXO47Q5MNV8 452 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 ANO5Q75V66 913 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 NEK9Q8TD19 979 aa12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
GPATCH4-216ENST00000531900 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 LAD1O00515 517 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 MARCH6O60337 910 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 MAFO75444 373 aaPredicted RBP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 XRCC6P12956 609 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 PDCP20941 246 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 WDR5P61964 334 aaKnown RBP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 LPIN1Q14693 890 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 TCTN1Q2MV58 587 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 EXOC8Q8IYI6 725 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 PPM1EQ8WY54 764 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 SEPT8Q92599 483 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 ZBTB10Q96DT7 871 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 COL25A1Q9BXS0 654 aaPredicted RBP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 CELF4Q9BZC1 486 aaKnown RBP12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 OSBPL7Q9BZF2 842 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 TRPV2Q9Y5S1 764 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 CDY2AQ9Y6F7 541 aa12.13□□□□□ -0.47
GPATCH4-216ENST00000531900 CTSHP09668 335 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 MYOGP15173 224 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 MUTP22033 750 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 TMOD1P28289 359 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 MCM7P33993 719 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 PRPHP41219 470 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 TXKP42681 527 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 PDIA5Q14554 519 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 ZNF174Q15697 407 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 TSHZ1Q6ZSZ6 1077 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
GPATCH4-216ENST00000531900 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms