RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 SUGCTQ9HAC7 445 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
FOXR1-202ENST00000531539 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 MAGEB2O15479 319 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 STBD1O95210 358 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 C22orf31O95567 290 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 P4HBP07237 508 aaKnown RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 MYOGP15173 224 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 WDR5P61964 334 aaKnown RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 RAB30Q15771 203 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 MTERF2Q49AM1 385 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 EFCAB12Q6NXP0 572 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 TMCO2Q7Z6W1 182 aaPredicted RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 DYDC2Q96IM9 177 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 MTMR9Q96QG7 549 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 NIFKQ9BYG3 293 aaKnown RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 NKX2-4Q9H2Z4 354 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 SEPT9Q9UHD8 586 aaPredicted RBP16.25■□□□□ 0.19
FOXR1-202ENST00000531539 GINS2Q9Y248 185 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 TRPV2Q9Y5S1 764 aa16.25■□□□□ 0.19
FOXR1-202ENST00000531539 TMEM150BA6NC51 233 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 DKC1O60832 514 aaKnown RBP eCLIP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 EFCAB14O75071 495 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 DEFB103AP81534 67 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 LPIN1Q14693 890 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 FBXO47Q5MNV8 452 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 HERC6Q8IVU3 1022 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 TPH2Q8IWU9 490 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 PPP1R16BQ96T49 567 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 SLC9A7Q96T83 725 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 IFIH1Q9BYX4 1025 aaKnown RBP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 TTYH1Q9H313 450 aaPredicted RBP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 YBX2Q9Y2T7 364 aaKnown RBP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 PCDHA11Q9Y5I1 949 aa16.24■□□□□ 0.19
FOXR1-202ENST00000531539 MYH9P35579 1960 aaKnown RBP16.24■□□□□ 0.19
FOXR1-202ENST00000531539 TMOD1P28289 359 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 CLCN3P51790 818 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 CYP4A11Q02928 519 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 SPIRE1Q08AE8 756 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 CUL4AQ13619 759 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 NBR1Q14596 966 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 LRRC71Q8N4P6 559 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 EIF2AK1Q9BQI3 630 aaKnown RBP16.23■□□□□ 0.19
FOXR1-202ENST00000531539 ZNF576Q9H609 170 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 SLC28A3Q9HAS3 691 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 AKT3Q9Y243 479 aa16.23■□□□□ 0.19
FOXR1-202ENST00000531539 SLITRK3O94933 977 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 AMHP03971 560 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 VTNP04004 478 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 CD52P31358 61 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 TECP42680 631 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 TOB1P50616 345 aaPredicted RBP16.22■□□□□ 0.19
FOXR1-202ENST00000531539 NPEPPSP55786 919 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 TARBP2Q15633 366 aaKnown RBP16.22■□□□□ 0.19
FOXR1-202ENST00000531539 KIZQ2M2Z5 673 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 TSHZ1Q6ZSZ6 1077 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 ANO5Q75V66 913 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 APBB2Q92870 758 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 ZSWIM4Q9H7M6 989 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 AGO3Q9H9G7 860 aaKnown RBP16.22■□□□□ 0.19
FOXR1-202ENST00000531539 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
FOXR1-202ENST00000531539 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
FOXR1-202ENST00000531539 A0A087WWV3 80 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 ENPP3O14638 875 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 ZBTB39O15060 712 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 TLL1O43897 1013 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 UPP2O95045 317 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 OR52Z1P0C646 297 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 TMEM266Q2M3C6 531 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 PLA2G4FQ68DD2 849 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 OTUD6AQ7L8S5 288 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 C4orf19Q8IY42 314 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 C4orf32Q8N8J7 132 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 ZNF579Q8NAF0 562 aaKnown RBP16.21■□□□□ 0.19
FOXR1-202ENST00000531539 ZNF668Q96K58 619 aaPredicted RBP16.21■□□□□ 0.19
FOXR1-202ENST00000531539 CEP170P1Q96L14 293 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 HSD17B14Q9BPX1 270 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 LXNQ9BS40 222 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 PADI3Q9ULW8 664 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 SQORQ9Y6N5 450 aa16.21■□□□□ 0.19
FOXR1-202ENST00000531539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.2■□□□□ 0.18
FOXR1-202ENST00000531539 DNM2P50570 870 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 CRYBB1P53674 252 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms