RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 RCSD1Q6JBY9 416 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 CCDC174Q6PII3 467 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 MFSD6Q6ZSS7 791 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 ALYREFQ86V81 257 aaKnown RBP8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 STAG1Q8WVM7 1258 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 DDX11Q96FC9 970 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 SCLYQ96I15 445 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 ARID3AQ99856 593 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 PLVAPQ9BX97 442 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 WNT8AQ9H1J5 351 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 HIPK3Q9H422 1215 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 SH2D4AQ9H788 454 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 NOP53Q9NZM5 478 aaKnown RBP8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 STX8Q9UNK0 236 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 MTMR7Q9Y216 660 aa8.21□□□□□ -1.1
TRIM53CP-201ENST00000531490 PRRC2BQ5JSZ5 2229 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 BAZ2BQ9UIF8 2168 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZNF236Q9UL36 1845 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 TRANK1O15050 2925 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZMYM6O95789 1325 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 NEDD4P46934 1319 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 DNAJC25-GNG10A0A024R161 153 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 CA3P07451 260 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 CYP21A2P08686 494 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 RARAP10276 462 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 CST5P28325 142 aaPredicted RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 GJA9P57773 515 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 PSMC6P62333 389 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 TTLL4Q14679 1199 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 SLFN13Q68D06 897 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 NOL8Q76FK4 1167 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 DHX32Q7L7V1 743 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 CPXCR1Q8N123 301 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 PCSK9Q8NBP7 692 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 PPP1R13LQ8WUF5 828 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 TMEM47Q9BQJ4 181 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 NOC4LQ9BVI4 516 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 UPF3AQ9H1J1 476 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 RAVER2Q9HCJ3 691 aaKnown RBP8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 CD320Q9NPF0 282 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZSWIM5Q9P217 1185 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 NAGPAQ9UK23 515 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 SLC4A7Q9Y6M7 1214 aa8.2□□□□□ -1.1
TRIM53CP-201ENST00000531490 PLIN4Q96Q06 1357 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 MROH7Q68CQ1 1323 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 B4E1Z4 1266 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 TMEM232C9JQI7 657 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 BMP3P12645 472 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 ATP2A2P16615 1042 aaKnown RBP8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 SNAP25P60880 206 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 CNTN2Q02246 1040 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 TRIP4Q15650 581 aaPredicted RBP8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 TTBK2Q6IQ55 1244 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 ARMCX2Q7L311 632 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 CCDC144CPQ8IYA2 1237 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 GMCL1P1Q8NEA9 526 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 RUFY2Q8WXA3 655 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 ARNTL2Q8WYA1 636 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 MAP4K1Q92918 833 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 SLF1Q9BQI6 1058 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 TEX13BQ9BXU2 312 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 KATNBL1Q9H079 304 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 TCP11L1Q9NUJ3 509 aa8.19□□□□□ -1.1
TRIM53CP-201ENST00000531490 TLR3O15455 904 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 B4GALT4O60513 344 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 NID1P14543 1247 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 SLC16A2P36021 539 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 ITGA7Q13683 1181 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 IMMTQ16891 758 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 BMP2KLQ5H9B9 411 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 PHLDB3Q6NSJ2 640 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 STOX1Q6ZVD7 989 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 CYB5R4Q7L1T6 521 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 DEFB128Q7Z7B8 93 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 ANKRD35Q8N283 1001 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 MSL3Q8N5Y2 521 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 SLC43A3Q8NBI5 491 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 LSG1Q9H089 658 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 MTIF3Q9H2K0 278 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 ABHD16BQ9H3Z7 469 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 SPC25Q9HBM1 224 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 TRMT13Q9NUP7 481 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 CTNNA3Q9UI47 895 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 TCF20Q9UGU0 1960 aaKnown RBP8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 A0A0G2JMZ2 1700 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 LAMA4Q16363 1823 aa8.18□□□□□ -1.1
TRIM53CP-201ENST00000531490 DYNC1LI2O43237 492 aaPredicted RBP8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 TOP1P11387 765 aaKnown RBP8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 CYP2C9P11712 490 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms