RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-221ENST00000531068 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
CAPN1-221ENST00000531068 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-221ENST00000531068 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 TBX3O15119 743 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 TDP2O95551 362 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 KRT2P35908 639 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 ERVK-21P61565 698 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 GSE1Q14687 1217 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 MIER3Q7Z3K6 550 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 ZBTB10Q96DT7 871 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 SAMD11Q96NU1 681 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 OSBPL7Q9BZF2 842 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-221ENST00000531068 LMCD1Q9NZU5 365 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 ZDHHC9Q9Y397 364 aa12.37□□□□□ -0.43
CAPN1-221ENST00000531068 LINC01553A4QN01 128 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 ZBTB42B2RXF5 422 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 GPR182O15218 404 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 CHMP2AO43633 222 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 CCNT1O60563 726 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 DKC1O60832 514 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 UPP2O95045 317 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 CD52P31358 61 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 CDC42EP1Q00587 391 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 PAK2Q13177 524 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 PIK3AP1Q6ZUJ8 805 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 TRMT1LQ7Z2T5 733 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 NSUN7Q8NE18 718 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 ETNPPLQ8TBG4 499 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 LLPHQ9BRT6 129 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
CAPN1-221ENST00000531068 IGSF9BQ9UPX0 1349 aa12.36□□□□□ -0.43
CAPN1-221ENST00000531068 RFXAPO00287 272 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 DLL1O00548 723 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 ZNF862O60290 1169 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 ARHGEF15O94989 841 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 C22orf31O95567 290 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 OATP04181 439 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 STAG3L1P0CL83 205 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-221ENST00000531068 PRKCEQ02156 737 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 SAFBQ15424 915 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAPN1-221ENST00000531068 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-221ENST00000531068 EFCAB12Q6NXP0 572 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 CCDC83Q8IWF9 413 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 SLFN12Q8IYM2 578 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-221ENST00000531068 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
CAPN1-221ENST00000531068 GJA10Q969M2 543 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 MAP7D2Q96T17 732 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 GJB4Q9NTQ9 266 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 MTCH2Q9Y6C9 303 aa12.35□□□□□ -0.43
CAPN1-221ENST00000531068 RPS6KA5O75582 802 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 MMP1P03956 469 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 DNM2P50570 870 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 PSMC5P62195 406 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
CAPN1-221ENST00000531068 GRB10Q13322 594 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 PPP2R5CQ13362 524 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 FIBCD1Q8N539 461 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
CAPN1-221ENST00000531068 JPH2Q9BR39 696 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-221ENST00000531068 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
CAPN1-221ENST00000531068 SUGCTQ9HAC7 445 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 KCNMB3Q9NPA1 279 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
CAPN1-221ENST00000531068 EPOPA6NHQ4 379 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 SLC37A4O43826 429 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 JAK2O60674 1132 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 RB1P06400 928 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 QARSP47897 775 aaKnown RBP12.33□□□□□ -0.44
CAPN1-221ENST00000531068 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
CAPN1-221ENST00000531068 NR5A1Q13285 461 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 PKP1Q13835 747 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.44
CAPN1-221ENST00000531068 PTPROQ16827 1216 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 KIZQ2M2Z5 673 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 KRT40Q6A162 431 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 RTN4RL1Q86UN2 441 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-221ENST00000531068 DIS3L2Q8IYB7 885 aaKnown RBP12.33□□□□□ -0.44
CAPN1-221ENST00000531068 EXOC8Q8IYI6 725 aa12.33□□□□□ -0.44
CAPN1-221ENST00000531068 MICALL1Q8N3F8 863 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms