RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CFAP157Q5JU67 520 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 ZNF280DQ6N043 979 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 KBTBD2Q8IY47 623 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 RIBC1Q8N443 379 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 DIS3LQ8TF46 1054 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 PGM2Q96G03 612 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 TMEM237Q96Q45 408 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 GSDMAQ96QA5 445 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 TXLNGQ9NUQ3 528 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 DDX43Q9NXZ2 648 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 TUBA8Q9NY65 449 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 LARSQ9P2J5 1176 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 ZNF148Q9UQR1 794 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 ZNF711Q9Y462 761 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 NDUFB9Q9Y6M9 179 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 PDS5AQ29RF7 1337 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 GOLGA8AA7E2F4 631 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 HGSO14964 777 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 LDHAP00338 332 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 NFKBIAP25963 317 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 HALP42357 657 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 EIF3BP55884 814 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TNNC1P63316 161 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 CNGA2Q16280 664 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 KCTD19Q17RG1 926 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 KHDC1Q4VXA5 237 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 MARK2Q7KZI7 788 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 ANKRD13CQ8N6S4 541 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 USP38Q8NB14 1042 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 DQX1Q8TE96 717 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TRIM11Q96F44 468 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 CCDC42Q96M95 316 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TXLNGYQ9BZA5 131 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 EPB41L4BQ9H329 900 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TIMM22Q9Y584 194 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 GNAT3A8MTJ3 354 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TCP11X1B4DZS4 312 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 BTBD19C9JJ37 291 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 PJA2O43164 708 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 LCA5LO95447 670 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 LMNAP02545 664 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 CDK4P11802 303 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 GNAT2P19087 354 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 STIP1P31948 543 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 IGHMBP2P38935 993 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TXKP42681 527 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 RNASE9P60153 205 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 CYP4A11Q02928 519 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 PAK1Q13153 545 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 GRAMD4Q6IC98 578 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 C3orf62Q6ZUJ4 267 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 ECHDC2Q86YB7 292 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 RBM46Q8TBY0 533 aaKnown RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 OLFM3Q96PB7 478 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TBC1D10AQ9BXI6 508 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 ASCC2Q9H1I8 757 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-219ENST00000531050 TBCCD1Q9NVR7 557 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 STK36Q9NRP7 1315 aa8.42□□□□□ -1.06
PTPRK-219ENST00000531050 NFAT5O94916 1531 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 KANSL1LA0AUZ9 987 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 GSTT2P0CG29 244 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 GSTT2BP0CG30 244 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 SRGNP10124 158 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 EPHB2P29323 1055 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 DNA2P51530 1060 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 RRAGBQ5VZM2 374 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 RNF43Q68DV7 783 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 CGB2Q6NT52 195 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 FBXO41Q8TF61 875 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 GAB3Q8WWW8 586 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 DSCC1Q9BVC3 393 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 CSRNP2Q9H175 543 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 AZI2Q9H6S1 392 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 FAIMQ9NVQ4 179 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 ARHGAP20Q9P2F6 1191 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 RPL26L1Q9UNX3 145 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 IQSEC3Q9UPP2 1182 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 TDRKHQ9Y2W6 561 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 MYH1P12882 1939 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 KDM3BQ7LBC6 1761 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 NPHP3-ACAD11A0A0J9YXS1 232 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 DAPK3O43293 454 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 BUB1O43683 1085 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 SERPINB7O75635 380 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 COL6A2P12110 1019 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 PIP4K2AP48426 406 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 USP11P51784 963 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 NEK3P51956 506 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 KIF11P52732 1056 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 AP1B1Q10567 949 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 CAMK2BQ13554 666 aa8.41□□□□□ -1.06
PTPRK-219ENST00000531050 R3HDM1Q15032 1099 aaKnown RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-219ENST00000531050 LRRC74BQ6ZQY2 392 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms