RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 ZC3H18Q86VM9 953 aaKnown RBP5.3□□□□□ -1.56
PTPRC-214ENST00000530727 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRC-214ENST00000530727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRC-214ENST00000530727 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 SLKQ9H2G2 1235 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-214ENST00000530727 FANCLQ9NW38 375 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 TRAF6Q9Y4K3 522 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 PCDHB4Q9Y5E5 795 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 TMEM2Q9UHN6 1383 aa5.3□□□□□ -1.56
PTPRC-214ENST00000530727 MAFKO60675 156 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 CDC45O75419 566 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 BMP7P18075 431 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 LONRF2Q1L5Z9 754 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 FBLN7Q53RD9 439 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 EMC4Q5J8M3 183 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 CD300LDQ6UXZ3 194 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 MIB1Q86YT6 1006 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 FNIP1Q8TF40 1166 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 EXOC2Q96KP1 924 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 ALG1Q9BT22 464 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 MYOM1P52179 1685 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 ZNF142P52746 1687 aaPredicted RBP5.29□□□□□ -1.56
PTPRC-214ENST00000530727 MED14O60244 1454 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 QRICH2Q9H0J4 1663 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 SH3BP5O60239 455 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 C8BP07358 591 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 GYS2P54840 703 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 MTDHQ86UE4 582 aaKnown RBP5.29□□□□□ -1.56
PTPRC-214ENST00000530727 FERMT3Q86UX7 667 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 FAM126BQ8IXS8 530 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 PIP4K2CQ8TBX8 421 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 PTPRN2Q92932 1015 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 CCDC136Q96JN2 1154 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 KCNJ15Q99712 375 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 DHRS4Q9BTZ2 278 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 MYOTQ9UBF9 498 aa5.29□□□□□ -1.56
PTPRC-214ENST00000530727 AQP7O14520 342 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 SOD2P04179 222 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 GNAT1P11488 350 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 MAMDC2Q7Z304 686 aaPredicted RBP5.28□□□□□ -1.56
PTPRC-214ENST00000530727 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 LINC01356Q8N9X3 169 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 PRPF38AQ8NAV1 312 aaKnown RBP5.28□□□□□ -1.56
PTPRC-214ENST00000530727 SH3TC2Q8TF17 1288 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 SMOC1Q9H4F8 434 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 SLC6A20Q9NP91 592 aa5.28□□□□□ -1.56
PTPRC-214ENST00000530727 MRPS23Q9Y3D9 190 aaKnown RBP5.28□□□□□ -1.56
PTPRC-214ENST00000530727 LAS1LQ9Y4W2 734 aaKnown RBP5.28□□□□□ -1.56
PTPRC-214ENST00000530727 EIF3AQ14152 1382 aaKnown RBP5.28□□□□□ -1.56
PTPRC-214ENST00000530727 HMGB1P1B2RPK0 211 aaPredicted RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 FAM47E-STBD1D6RA91 191 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 TRIM13O60858 407 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 TADA3O75528 432 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 STAT5AP42229 794 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 HTRA3P83110 453 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 CAP1Q01518 475 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 SPIRE1Q08AE8 756 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ZC3H12BQ5HYM0 836 aaKnown RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ARRDC4Q8NCT1 418 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 PHOSPHO1Q8TCT1 267 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ZBTB8AQ96BR9 441 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 NOX5Q96PH1 765 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ZCCHC4Q9H5U6 513 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 PCDH18Q9HCL0 1135 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 NGRNQ9NPE2 291 aaKnown RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 THRAP3Q9Y2W1 955 aaKnown RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ADAMTS13Q76LX8 1427 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 YTHDC2Q9H6S0 1430 aaKnown RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 DLC1Q96QB1 1528 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 CEP170BQ9Y4F5 1589 aaPredicted RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 KNDC1Q76NI1 1749 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 TCRBV5S2A0A599 114 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 FFAR3O14843 346 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 MAFGO15525 162 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 INHBBP09529 407 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 C6orf222P0C671 652 aaPredicted RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 COL6A2P12110 1019 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 GABREP78334 506 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 NKX3-2P78367 333 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 TMF1P82094 1093 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 SMAD4Q13485 552 aaKnown RBP5.27□□□□□ -1.57
PTPRC-214ENST00000530727 MAP9Q49MG5 647 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 VWA3BQ502W6 1294 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 ZFYVE27Q5T4F4 411 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 CYP4F22Q6NT55 531 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 DTLQ9NZJ0 730 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 PNMA2Q9UL42 364 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 PLEKHG1Q9ULL1 1385 aa5.27□□□□□ -1.57
PTPRC-214ENST00000530727 TECPR2O15040 1411 aa5.26□□□□□ -1.57
PTPRC-214ENST00000530727 METP08581 1390 aa5.26□□□□□ -1.57
PTPRC-214ENST00000530727 ABCC11Q96J66 1382 aa5.26□□□□□ -1.57
PTPRC-214ENST00000530727 CENPJQ9HC77 1338 aaPredicted RBP5.26□□□□□ -1.57
PTPRC-214ENST00000530727 CCER2I3L3R5 266 aa5.26□□□□□ -1.57
PTPRC-214ENST00000530727 SLC27A2O14975 620 aa5.26□□□□□ -1.57
PTPRC-214ENST00000530727 SASH1O94885 1247 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms