RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 RNPC3Q96LT9 517 aaKnown RBP6.83□□□□□ -1.32
USP47-209ENST00000530041 LMF1Q96S06 567 aa6.83□□□□□ -1.32
USP47-209ENST00000530041 TRAF5O00463 557 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 HMGCRP04035 888 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 ZNF20P17024 532 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 SDSP20132 328 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 FLT3P36888 993 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 ADCY8P40145 1251 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 KCNQ1P51787 676 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 CD83Q01151 205 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 ICAM4Q14773 271 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 EIF4HQ15056 248 aaKnown RBP6.82□□□□□ -1.32
USP47-209ENST00000530041 ZMAT1Q5H9K5 638 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 CALML6Q8TD86 181 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 CD248Q9HCU0 757 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 CABP5Q9NP86 173 aa6.82□□□□□ -1.32
USP47-209ENST00000530041 A0A0G2JNJ9 132 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 PATE3B3GLJ2 98 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 KRT37O76014 449 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 FNTBP49356 437 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 RRADP55042 308 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 TCEA2Q15560 299 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 ZXDCQ2QGD7 858 aaPredicted RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 PIK3R6Q5UE93 754 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 UBE2R2Q712K3 238 aaPredicted RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 OTOP2Q7RTS6 562 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 GGNQ86UU5 652 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 HOMER1Q86YM7 354 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 DVL3Q92997 716 aaPredicted RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 FOXRED1Q96CU9 486 aaPredicted RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 NEIL1Q96FI4 390 aaPredicted RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 INTS7Q9NVH2 962 aaKnown RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 MAGEC2Q9UBF1 373 aaPredicted RBP6.81□□□□□ -1.32
USP47-209ENST00000530041 Q9UFV3 132 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 MYRFQ9Y2G1 1151 aa6.81□□□□□ -1.32
USP47-209ENST00000530041 PTPDC1A2A3K4 754 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 C1QTNF3-AMACRE9PGA6 284 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 DVL2O14641 736 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 JMJD7P0C870 316 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 KIF11P52732 1056 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 ALDH6A1Q02252 535 aaKnown RBP6.8□□□□□ -1.32
USP47-209ENST00000530041 MOGSQ13724 837 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 CDCA2Q69YH5 1023 aaPredicted RBP6.8□□□□□ -1.32
USP47-209ENST00000530041 TRIM68Q6AZZ1 485 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 RTN4RL1Q86UN2 441 aaPredicted RBP6.8□□□□□ -1.32
USP47-209ENST00000530041 ERCC4Q92889 916 aaPredicted RBP6.8□□□□□ -1.32
USP47-209ENST00000530041 FOXB1Q99853 325 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 ACSS2Q9NR19 701 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 B4GALT6Q9UBX8 382 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 CDC42EP3Q9UKI2 254 aa6.8□□□□□ -1.32
USP47-209ENST00000530041 CBX4O00257 560 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 MAFO75444 373 aaPredicted RBP6.79□□□□□ -1.32
USP47-209ENST00000530041 INSRRP14616 1297 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 APEX1P27695 318 aaKnown RBP6.79□□□□□ -1.32
USP47-209ENST00000530041 RAC3P60763 192 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 NFYCQ13952 458 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 GRAMD4Q6IC98 578 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 LARP4Q71RC2 724 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP47-209ENST00000530041 E2F7Q96AV8 911 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 GNRHR2Q96P88 292 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 LRRC37BQ96QE4 947 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 JAG2Q9Y219 1238 aa6.79□□□□□ -1.32
USP47-209ENST00000530041 H7C1D1 291 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 ZNF623O75123 536 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 CYP17A1P05093 508 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 CFAP100Q494V2 611 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 C16orf86Q6ZW13 317 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 TAX1BP1Q86VP1 789 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 APPBP2Q92624 585 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 KIAA1683Q9H0B3 1180 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 KLC2Q9H0B6 622 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 DEF6Q9H4E7 631 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 PCIF1Q9H4Z3 704 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 NR2E1Q9Y466 385 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 CD2APQ9Y5K6 639 aa6.78□□□□□ -1.32
USP47-209ENST00000530041 CR2P20023 1033 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 MEOX1P50221 254 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 MAP3K12Q12852 859 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.33
USP47-209ENST00000530041 PCOLCEQ15113 449 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 ZNF174Q15697 407 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 TBR1Q16650 682 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 AGBL4Q5VU57 503 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 TCTN3Q6NUS6 607 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 USP30Q70CQ3 517 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 RTKN2Q8IZC4 609 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 KIAA1958Q8N8K9 716 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 GIMAP8Q8ND71 665 aaPredicted RBP6.77□□□□□ -1.33
USP47-209ENST00000530041 Q8TCH9 128 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 WWC2-AS2Q96NR7 200 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 CDK5RAP1Q96SZ6 601 aaKnown RBP6.77□□□□□ -1.33
USP47-209ENST00000530041 ORAI3Q9BRQ5 295 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 TSC22D4Q9Y3Q8 395 aa6.77□□□□□ -1.33
USP47-209ENST00000530041 ARHGAP6O43182 974 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms