RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DLG3Q92796 817 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 MAGEC2Q9UBF1 373 aaPredicted RBP6.42□□□□□ -1.38
C11orf88-204ENST00000529661 ADAM29Q9UKF5 820 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 PTPDC1A2A3K4 754 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 PRAMEF22A3QJZ6 481 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 GSG1L2A8MUP6 293 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 K7ESM1 405 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 LAMTOR5O43504 91 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 MPIG6BO95866 241 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 PLATP00750 562 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 POU3F3P20264 500 aaPredicted RBP6.41□□□□□ -1.38
C11orf88-204ENST00000529661 MECP2P51608 486 aaKnown RBP6.41□□□□□ -1.38
C11orf88-204ENST00000529661 KIF11P52732 1056 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 IL13RA1P78552 427 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 CATSPEREQ5SY80 951 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 CDCA2Q69YH5 1023 aaPredicted RBP6.41□□□□□ -1.38
C11orf88-204ENST00000529661 LRSAM1Q6UWE0 723 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 OTOP1Q7RTM1 612 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 WNK4Q96J92 1243 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 AMNQ9BXJ7 453 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 PCIF1Q9H4Z3 704 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 CAAP1Q9H8G2 361 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 JADE2Q9NQC1 790 aa6.41□□□□□ -1.38
C11orf88-204ENST00000529661 TRAF5O00463 557 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 KPNA6O60684 536 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 ZBTB48P10074 688 aaPredicted RBP6.4□□□□□ -1.38
C11orf88-204ENST00000529661 CSF2RBP32927 897 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 ECE1P42892 770 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 NEK4P51957 841 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 SURF1Q15526 300 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 ARHGEF18Q6ZSZ5 1173 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 OTOP2Q7RTS6 562 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 RNF180Q86T96 592 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 LRRTM3Q86VH5 581 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 IFNL2Q8IZJ0 200 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 AJUBAQ96IF1 538 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 BTBD2Q9BX70 525 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 MAPRE3Q9UPY8 281 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 PTPN22Q9Y2R2 807 aa6.4□□□□□ -1.38
C11orf88-204ENST00000529661 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 H7C1D1 291 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 CBX4O00257 560 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 PDE8AO60658 829 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 ZNF888P0CJ79 500 aaPredicted RBP6.39□□□□□ -1.39
C11orf88-204ENST00000529661 POU3F2P20265 443 aaPredicted RBP6.39□□□□□ -1.39
C11orf88-204ENST00000529661 POLD1P28340 1107 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 SDHAP31040 664 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 KCNQ1P51787 676 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 USP10Q14694 798 aaKnown RBP6.39□□□□□ -1.39
C11orf88-204ENST00000529661 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 GLB1LQ6UWU2 654 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 LIMS2Q7Z4I7 341 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 PRRT2Q7Z6L0 340 aaPredicted RBP6.39□□□□□ -1.39
C11orf88-204ENST00000529661 REXO1L1PQ8IX06 675 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 KATNBL1Q9H079 304 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 OR10A5Q9H207 317 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 CDC42EP3Q9UKI2 254 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 ASB1Q9Y576 335 aa6.39□□□□□ -1.39
C11orf88-204ENST00000529661 DVL2O14641 736 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 RAB11FIP3O75154 756 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 ITGB3P05106 788 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 RRADP55042 308 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 PPP2CBP62714 309 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 PPP2CAP67775 309 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 CD83Q01151 205 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 TOP3AQ13472 1001 aaPredicted RBP6.38□□□□□ -1.39
C11orf88-204ENST00000529661 ZNF174Q15697 407 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 ZNF568Q3ZCX4 644 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
C11orf88-204ENST00000529661 KIAA1958Q8N8K9 716 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 CALML6Q8TD86 181 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 TARS2Q9BW92 718 aaKnown RBP6.38□□□□□ -1.39
C11orf88-204ENST00000529661 CARD11Q9BXL7 1154 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 PPP4R1LQ9P1A2 415 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 B4GALT6Q9UBX8 382 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
C11orf88-204ENST00000529661 NPEPPSL1A6NEC2 478 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 GOLGA6L22H0YM25 854 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 CUTAO60888 179 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 HMGCRP04035 888 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 CDK11BP21127 795 aaKnown RBP6.37□□□□□ -1.39
C11orf88-204ENST00000529661 SOX5P35711 763 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 CXXC5Q7LFL8 322 aaKnown RBP6.37□□□□□ -1.39
C11orf88-204ENST00000529661 STAG1Q8WVM7 1258 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 LOXL4Q96JB6 756 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 PTPN18Q99952 460 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 MTFR1LQ9H019 292 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 ACSS2Q9NR19 701 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 FBXO10Q9UK96 956 aa6.37□□□□□ -1.39
C11orf88-204ENST00000529661 SLC9A1P19634 815 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 ETV4P43268 484 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 EPHB4P54760 987 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 STILQ15468 1287 aa6.36□□□□□ -1.39
C11orf88-204ENST00000529661 ZNF827Q17R98 1081 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms