RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 NFX1Q12986 1120 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 TDGQ13569 410 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 SMC1AQ14683 1233 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 BMS1Q14692 1282 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 KIAA1841Q6NSI8 718 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 RUBCNQ92622 972 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 ADAM2Q99965 735 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 ATP6V0A4Q9HBG4 840 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 DZANK1Q9NVP4 752 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 TMEM161AQ9NX61 479 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 HCFC2Q9Y5Z7 792 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 SALL3Q9BXA9 1300 aa13.39□□□□□ -0.27
AMBRA1-207ENST00000529553 C2orf71A6NGG8 1288 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 GPR182O15218 404 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 HOXA2O43364 376 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 KCNA2P16389 499 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 MARK3P27448 753 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 PDE4AP27815 886 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 IGBP1P78318 339 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 ZC3H14Q6PJT7 736 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 KCNT2Q6UVM3 1135 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 ZNF589Q86UQ0 364 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 CYP2W1Q8TAV3 490 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 KRT23Q9C075 422 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-207ENST00000529553 B4E1Z4 1266 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 PIK3CDO00329 1044 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 MGEA5O60502 916 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 ATP9AO75110 1047 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 RPS6KA5O75582 802 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 OTOP3Q7RTS5 596 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 PIGSQ96S52 555 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 UBAC1Q9BSL1 405 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 AZI2Q9H6S1 392 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 WNT16Q9UBV4 365 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 CDH22Q9UJ99 828 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 DUSP12Q9UNI6 340 aa13.37□□□□□ -0.27
AMBRA1-207ENST00000529553 PLXNA4Q9HCM2 1894 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 TMEM266Q2M3C6 531 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 SIX5Q8N196 739 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 GPR161Q8N6U8 529 aaKnown RBP13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 CUL5Q93034 780 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 ZFHX4Q86UP3 3567 aa13.36□□□□□ -0.27
AMBRA1-207ENST00000529553 MYO10Q9HD67 2058 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 KIAA1671Q9BY89 1806 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 SLC26A2P50443 739 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 TBC1D8BQ0IIM8 1120 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 GIT2Q14161 759 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 SEC23AQ15436 765 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 RSPO4Q2I0M5 234 aaPredicted RBP13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 RARS2Q5T160 578 aaKnown RBP13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 LRRC55Q6ZSA7 311 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 SMARCC2Q8TAQ2 1214 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 ZBTB10Q96DT7 871 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 PCYT2Q99447 389 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 KCNK12Q9HB15 430 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 IRAK3Q9Y616 596 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 R4GN57 208 aa13.35□□□□□ -0.27
AMBRA1-207ENST00000529553 TPRP12270 2363 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 CXCL14O95715 111 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 WEE2P0C1S8 567 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 FGFR1P11362 822 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 ITGB5P18084 799 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 GRM4Q14833 912 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 SLC35G1Q2M3R5 365 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 LRRC43Q8N309 656 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 HINFPQ9BQA5 517 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
AMBRA1-207ENST00000529553 STK25O00506 426 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 MEIS2O14770 477 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 CYTH3O43739 400 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 KLRC1P26715 233 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 STAT5BP51692 787 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 CRYBB1P53674 252 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 PDE1AP54750 535 aa13.33□□□□□ -0.28
AMBRA1-207ENST00000529553 MTMR1Q13613 665 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms