RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NIPA1Q7RTP0 329 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 KRT25Q7Z3Z0 450 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 GIMAP8Q8ND71 665 aaPredicted RBP7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 FBXO18Q8NFZ0 1043 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 AFG1LQ8WV93 481 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 TNFRSF25Q93038 417 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 C8orf76Q96K31 380 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 GLT1D1Q96MS3 346 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 HTATIP2Q9BUP3 242 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 BRINP2Q9C0B6 783 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 MLXIPQ9HAP2 919 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 FRMD4BQ9Y2L6 1034 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 ELP1O95163 1332 aa7.09□□□□□ -1.27
ATPAF1-209ENST00000529214 DNAH12Q6ZR08 3092 aa7.09□□□□□ -1.28
ATPAF1-209ENST00000529214 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 ARHGAP33O14559 1287 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 KIF20AO95235 890 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 PARNO95453 639 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 MMP3P08254 477 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 NUDT7P0C024 238 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 HOXD8P13378 290 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 GJB2P29033 226 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 CDK7P50613 346 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 GUCY1B3Q02153 619 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 NR5A1Q13285 461 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 SNX17Q15036 470 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 TCEAL1Q15170 157 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 NONOQ15233 471 aaKnown RBP eCLIP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 ZRSR2Q15696 482 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 DGKDQ16760 1214 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 LRRC26Q2I0M4 334 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 EARS2Q5JPH6 523 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 METTL7BQ6UX53 244 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 CXCL17Q6UXB2 119 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 PLA2G4DQ86XP0 818 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 DIS3L2Q8IYB7 885 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 PPTC7Q8NI37 304 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 FAM174AQ8TBP5 190 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 DPF3Q92784 378 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 INTS4Q96HW7 963 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 SPATA33Q96N06 139 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 MAP7D2Q96T17 732 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 AGO4Q9HCK5 861 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 BRMS1Q9HCU9 246 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 STARD7Q9NQZ5 370 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 MAGEC2Q9UBF1 373 aaPredicted RBP7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 PCDHGC3Q9UN70 934 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 GRIN2DO15399 1336 aa7.08□□□□□ -1.28
ATPAF1-209ENST00000529214 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 K7ELQ4 463 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 TK2O00142 265 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 ARVCFO00192 962 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 DHX15O43143 795 aaKnown RBP7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 SORBS3O60504 671 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 MYL3P08590 195 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 PRSS12P56730 875 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 DPYDQ12882 1025 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 ITGA7Q13683 1181 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 NCOA4Q13772 614 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 SAFBQ15424 915 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 INF2Q27J81 1249 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 Q4G0T1 1027 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 PRR16Q569H4 304 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 PPP4R3AQ6IN85 833 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 MOXD1Q6UVY6 613 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 PIK3AP1Q6ZUJ8 805 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 NEK8Q86SG6 692 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 ATL2Q8NHH9 583 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 SEPT1Q8WYJ6 367 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 KAT2BQ92831 832 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 RNF34Q969K3 372 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 LENG9Q96B70 501 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 MBOAT7Q96N66 472 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 GPR20Q99678 358 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 MTG1Q9BT17 334 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 SEZ6LQ9BYH1 1024 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 FOXP1Q9H334 677 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 LHX6Q9UPM6 363 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 SMC3Q9UQE7 1217 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 KIF3AQ9Y496 699 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 TELO2Q9Y4R8 837 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 KIAA1217Q5T5P2 1943 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 NFASCO94856 1347 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 LRRC37A2A6NM11 1700 aa7.07□□□□□ -1.28
ATPAF1-209ENST00000529214 GSTTP1A0A1W2PQM5 241 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 IPO5O00410 1097 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 NOP56O00567 594 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 MSH4O15457 936 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 SH3BP5O60239 455 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 PRMT3O60678 531 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 TDP2O95551 362 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 TPM2P07951 284 aa7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 U2AF2P26368 475 aaKnown RBP eCLIP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 DNAJA1P31689 397 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-209ENST00000529214 RTP1P59025 263 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms