RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PHOSPHO1Q8TCT1 267 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 SH3RF2Q8TEC5 729 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 TEPSINQ96N21 525 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 SYT3Q9BQG1 590 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 SMOC1Q9H4F8 434 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 HSPBP1Q9NZL4 362 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 MAPRE3Q9UPY8 281 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 MIA2Q96PC5 1412 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 ARHGEF5Q12774 1597 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 A2ML1A8K2U0 1454 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 CAMSAP1Q5T5Y3 1602 aa6.72□□□□□ -1.33
CSDE1-212ENST00000529046 SUPT6HQ7KZ85 1726 aaKnown RBP6.71□□□□□ -1.34
CSDE1-212ENST00000529046 VPS8Q8N3P4 1428 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 GSTA4O15217 222 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 NKRFO15226 690 aaKnown RBP eCLIP6.71□□□□□ -1.34
CSDE1-212ENST00000529046 MAFKO60675 156 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 AMY2AP04746 511 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 AMY2BP19961 511 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 THBS2P35442 1172 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 NKX3-2P78367 333 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 SPIRE1Q08AE8 756 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 GPR19Q15760 415 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 ERICH6BQ5W0A0 696 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 HHIPL2Q6UWX4 724 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 ZC3H7AQ8IWR0 971 aaKnown RBP6.71□□□□□ -1.34
CSDE1-212ENST00000529046 TTLL11Q8NHH1 800 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 PIP4K2CQ8TBX8 421 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 TARS2Q9BW92 718 aaKnown RBP6.71□□□□□ -1.34
CSDE1-212ENST00000529046 SLKQ9H2G2 1235 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-212ENST00000529046 SMURF1Q9HCE7 757 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 PZPP20742 1482 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 CAMSAP2Q08AD1 1489 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 LRRC9Q6ZRR7 1453 aa6.71□□□□□ -1.34
CSDE1-212ENST00000529046 ADAMTS20P59510 1910 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 CEP170BQ9Y4F5 1589 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-212ENST00000529046 TCRBV5S2A0A599 114 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 CCDC66A2RUB6 948 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 TRAF5O00463 557 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 KRIT1O00522 736 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 KIF3BO15066 747 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 OPA1O60313 960 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 PYGMP11217 842 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 STAT3P40763 770 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 ITGA1P56199 1179 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 GJA9P57773 515 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 CR1LQ2VPA4 569 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 FAM47CQ5HY64 1035 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 KRT26Q7Z3Y9 468 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 STK32CQ86UX6 486 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 THEMISQ8N1K5 641 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-212ENST00000529046 PPM1KQ8N3J5 372 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 TTLL6Q8N841 843 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 ARRDC4Q8NCT1 418 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 TOE1Q96GM8 510 aaKnown RBP6.7□□□□□ -1.34
CSDE1-212ENST00000529046 DTLQ9NZJ0 730 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 MYOTQ9UBF9 498 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 ASH2LQ9UBL3 628 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 COQ6Q9Y2Z9 468 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 CLTCQ00610 1675 aaKnown RBP6.7□□□□□ -1.34
CSDE1-212ENST00000529046 WASHC2CQ9Y4E1 1318 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 KDM5DQ9BY66 1539 aa6.7□□□□□ -1.34
CSDE1-212ENST00000529046 NLRP1Q9C000 1473 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 CBX4O00257 560 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 GLRX3O76003 335 aaKnown RBP6.69□□□□□ -1.34
CSDE1-212ENST00000529046 GNAT1P11488 350 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 PDE6AP16499 860 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 TMEM177Q53S58 311 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 CDCA2Q69YH5 1023 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-212ENST00000529046 DDX53Q86TM3 631 aaKnown RBP6.69□□□□□ -1.34
CSDE1-212ENST00000529046 IGSF22Q8N9C0 903 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 SAMD15Q9P1V8 674 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 SRPK3Q9UPE1 567 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 MAST1Q9Y2H9 1570 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 TNRQ92752 1358 aa6.69□□□□□ -1.34
CSDE1-212ENST00000529046 DNMT1P26358 1616 aaKnown RBP6.68□□□□□ -1.34
CSDE1-212ENST00000529046 MYO3AQ8NEV4 1616 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 MYOM3Q5VTT5 1437 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 MED14O60244 1454 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 MAN2B1O00754 1011 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 NOBOXO60393 691 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 PDE8AO60658 829 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 JMJD7P0C870 316 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 SRGAP2CP0DJJ0 459 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 RPL13P26373 211 aaKnown RBP6.68□□□□□ -1.34
CSDE1-212ENST00000529046 FLT3P36888 993 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 ZNF761Q86XN6 746 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-212ENST00000529046 NOSTRINQ8IVI9 506 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 ADAMTS17Q8TE56 1095 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 KCNJ15Q99712 375 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSDE1-212ENST00000529046 TELO2Q9Y4R8 837 aa6.68□□□□□ -1.34
CSDE1-212ENST00000529046 ZBTB48P10074 688 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-212ENST00000529046 COL6A2P12110 1019 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-212ENST00000529046 POU3F3P20264 500 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-212ENST00000529046 BUD31P41223 144 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-212ENST00000529046 JAM2P57087 298 aa6.67□□□□□ -1.34
CSDE1-212ENST00000529046 SEPT7Q16181 437 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms