RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 TRPV6Q9H1D0 765 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 WNT8AQ9H1J5 351 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 RBM28Q9NW13 759 aaKnown RBP8.13□□□□□ -1.11
ITGB1-218ENST00000528877 MTMR10Q9NXD2 777 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 MRVI1Q9Y6F6 885 aa8.13□□□□□ -1.11
ITGB1-218ENST00000528877 UMODL1Q5DID0 1318 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 HAS3O00219 553 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 REC8O95072 547 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 MYL3P08590 195 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 CSF2RAP15509 400 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 UBA1P22314 1058 aaKnown RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 HOXC8P31273 242 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 MRPS9P82933 396 aaKnown RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 ADCK5Q3MIX3 580 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 TMEM240Q5SV17 173 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 CELF3Q5SZQ8 465 aaKnown RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 SEPT14Q6ZU15 432 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 MICU3Q86XE3 530 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 PGBD3Q8N328 593 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 VWCEQ96DN2 955 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 CTAGE1Q96RT6 745 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 IL23AQ9NPF7 189 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 TRMT13Q9NUP7 481 aaKnown RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 STXBP5LQ9Y2K9 1186 aa8.12□□□□□ -1.11
ITGB1-218ENST00000528877 BAZ2BQ9UIF8 2168 aaKnown RBP8.12□□□□□ -1.11
ITGB1-218ENST00000528877 CUL9Q8IWT3 2517 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 ZBTB43O43298 467 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 FIBPO43427 364 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 RXRAP19793 462 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 CASTP20810 708 aaKnown RBP8.11□□□□□ -1.11
ITGB1-218ENST00000528877 CYP2C18P33260 490 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 RFC2P35250 354 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 EVCP57679 992 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 RTN1Q16799 776 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 METTL7BQ6UX53 244 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 Q7L0L9 218 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
ITGB1-218ENST00000528877 CAGE1Q8TC20 777 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 HERVK_113Q902F9 699 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 CUL5Q93034 780 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 GPRASP2Q96D09 838 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 GUCD1Q96NT3 240 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 SENP7Q9BQF6 1050 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 LRRC2Q9BYS8 371 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
ITGB1-218ENST00000528877 SNX14Q9Y5W7 946 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 VCANP13611 3396 aa8.11□□□□□ -1.11
ITGB1-218ENST00000528877 SPTBN5Q9NRC6 3674 aaKnown RBP8.1□□□□□ -1.11
ITGB1-218ENST00000528877 A6NJY4 79 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 TMEM229AB2RXF0 380 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 PPFIA4O75335 1185 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 GGPS1O95749 300 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 NEFLP07196 543 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 MYCLP12524 364 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-218ENST00000528877 SP2Q02086 613 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 BFSP2Q13515 415 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 NEDD9Q14511 834 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 HSDL1Q3SXM5 330 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 WWC2Q6AWC2 1192 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 USP17L6PQ6QN14 398 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 SYNE3Q6ZMZ3 975 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 FCHSD1Q86WN1 690 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 DHX37Q8IY37 1157 aaKnown RBP8.1□□□□□ -1.11
ITGB1-218ENST00000528877 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 AFAP1L1Q8TED9 768 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 CDHR1Q96JP9 859 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 SPATA33Q96N06 139 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 GLT8D2Q9H1C3 349 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
ITGB1-218ENST00000528877 MTIF3Q9H2K0 278 aaKnown RBP8.1□□□□□ -1.11
ITGB1-218ENST00000528877 PSTPIP2Q9H939 334 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-218ENST00000528877 BARHL2Q9NY43 387 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
ITGB1-218ENST00000528877 COL4A6Q14031 1691 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 KLF18A0A0U1RQI7 1052 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-218ENST00000528877 CCDC196A0A1B0GTZ2 297 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-218ENST00000528877 ESYT2A0FGR8 921 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 GOLGA8AA7E2F4 631 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 GOLGA8BA8MQT2 603 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 STXBP3O00186 592 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 DLL1O00548 723 aa8.09□□□□□ -1.11
ITGB1-218ENST00000528877 PARNO95453 639 aaKnown RBP8.09□□□□□ -1.11
ITGB1-218ENST00000528877 ZNF286BP0CG31 522 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms