RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 SLC39A2Q9NP94 309 aa4.26□□□□□ -1.73
CD44-229ENST00000528672 EMC7Q9NPA0 242 aa4.26□□□□□ -1.73
CD44-229ENST00000528672 MYOTQ9UBF9 498 aa4.26□□□□□ -1.73
CD44-229ENST00000528672 ASH2LQ9UBL3 628 aa4.26□□□□□ -1.73
CD44-229ENST00000528672 B4GALT6Q9UBX8 382 aa4.26□□□□□ -1.73
CD44-229ENST00000528672 RFPL1O75677 317 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 DGKIO75912 1065 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 LRG1P02750 347 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 C8BP07358 591 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 CT47B1P0C2W7 299 aaPredicted RBP4.25□□□□□ -1.73
CD44-229ENST00000528672 CLEC2LP0C7M8 214 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 PFKLP17858 780 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 FBLN1P23142 703 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 BUD31P41223 144 aaPredicted RBP4.25□□□□□ -1.73
CD44-229ENST00000528672 LIMS1P48059 325 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 LSSP48449 732 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 CDR1P51861 262 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 KIF11P52732 1056 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 OCRLQ01968 901 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 GPR19Q15760 415 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 CR1LQ2VPA4 569 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 GFOD2Q3B7J2 385 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 ZNF385BQ569K4 471 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 BTBD8Q5XKL5 378 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 NXNQ6DKJ4 435 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 CIAPIN1Q6FI81 312 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 TMEM132EQ6IEE7 984 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 SLC4A10Q6U841 1118 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 UNQ6494/PRO21346Q6UXR6 183 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 TTLL10Q6ZVT0 673 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 PROSER1Q86XN7 944 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 ADGRG2Q8IZP9 1017 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 CLRN3Q8NCR9 226 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 PANK1Q8TE04 598 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 MZB1Q8WU39 189 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 TGFBRAP1Q8WUH2 860 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 DDX11Q96FC9 970 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 PCDH18Q9HCL0 1135 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 LUC7LQ9NQ29 371 aaKnown RBP4.25□□□□□ -1.73
CD44-229ENST00000528672 RIC8BQ9NVN3 520 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 IP6K2Q9UHH9 426 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 RAPGEFL1Q9UHV5 662 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 SMG5Q9UPR3 1016 aaKnown RBP4.25□□□□□ -1.73
CD44-229ENST00000528672 COA3Q9Y2R0 106 aaPredicted RBP4.25□□□□□ -1.73
CD44-229ENST00000528672 LUC7L2Q9Y383 392 aaKnown RBP4.25□□□□□ -1.73
CD44-229ENST00000528672 PCDHB4Q9Y5E5 795 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 PCDHA5Q9Y5H7 936 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 IRAK3Q9Y616 596 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 COMMD10Q9Y6G5 202 aa4.25□□□□□ -1.73
CD44-229ENST00000528672 HGSO14964 777 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 BUB1BO60566 1050 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 H2AFYO75367 372 aaKnown RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 ULK1O75385 1050 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 ABLIM3O94929 683 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 SNUPNO95149 360 aaKnown RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 ASGR2P07307 311 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 U2AF1L5P0DN76 240 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 ZSCAN22P10073 491 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 MYBL2P10244 700 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 PTPN1P18031 435 aaKnown RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 IGFBP6P24592 240 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 IARSP41252 1262 aaKnown RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 KPNA1P52294 538 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 U2AF1Q01081 240 aaKnown RBP eCLIP4.24□□□□□ -1.73
CD44-229ENST00000528672 BRD3Q15059 726 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 CHRNA2Q15822 529 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 ABCB5Q2M3G0 1257 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 RGL3Q3MIN7 710 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 FAM47CQ5HY64 1035 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 BROXQ5VW32 411 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 KSR2Q6VAB6 950 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 KCTD1Q719H9 257 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 OTOP1Q7RTM1 612 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 HDGFL2Q7Z4V5 671 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 LDHDQ86WU2 507 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 MAGEB6Q8N7X4 407 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 KIAA1958Q8N8K9 716 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 SEC14L1Q92503 715 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 DLG3Q92796 817 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 AHCYL2Q96HN2 611 aaKnown RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 ZNF496Q96IT1 587 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 RHOBTB2Q9BYZ6 727 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 ZMAT4Q9H898 229 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 TOPORSQ9NS56 1045 aaPredicted RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 UCKL1Q9NWZ5 548 aa4.24□□□□□ -1.73
CD44-229ENST00000528672 DBR1Q9UK59 544 aaKnown RBP4.24□□□□□ -1.73
CD44-229ENST00000528672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.23□□□□□ -1.73
CD44-229ENST00000528672 SLC12A8A0AV02 714 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 PRAMEF25A6NGN4 478 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 K7ESF4 209 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 GSTA4O15217 222 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 PRPF3O43395 683 aaKnown RBP4.23□□□□□ -1.73
CD44-229ENST00000528672 MT-CO1P00395 513 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
CD44-229ENST00000528672 GLRBP48167 497 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 SMAD4Q13485 552 aaKnown RBP4.23□□□□□ -1.73
CD44-229ENST00000528672 VMACQ2NL98 169 aa4.23□□□□□ -1.73
CD44-229ENST00000528672 EMC4Q5J8M3 183 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms