RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 STAT2P52630 851 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 EPHB4P54760 987 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 SLC15A2Q16348 729 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 C10orf76Q5T2E6 689 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 SLC5A5Q92911 643 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 DYDC2Q96IM9 177 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 NAGPAQ9UK23 515 aa22.32■■□□□ 1.16
SMIM3-201ENST00000526627 BZW2Q9Y6E2 419 aaKnown RBP22.32■■□□□ 1.16
SMIM3-201ENST00000526627 PPP2R5CQ13362 524 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 EMBQ6PCB8 327 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 DNAAF5Q86Y56 855 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 CAVIN3Q969G5 261 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 FIZ1Q96SL8 496 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 GDF3Q9NR23 364 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 TULP2O00295 520 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 NMT1P30419 496 aaKnown RBP22.31■■□□□ 1.16
SMIM3-201ENST00000526627 LEKR1Q6ZMV7 388 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 GBP6Q6ZN66 633 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 SH3GL2Q99962 352 aa22.31■■□□□ 1.16
SMIM3-201ENST00000526627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.31■■□□□ 1.164e-6■■■□□ 16.5
SMIM3-201ENST00000526627 EIF3DO15371 548 aaKnown RBP eCLIP22.3■■□□□ 1.16
SMIM3-201ENST00000526627 CFBP00751 764 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 LRCH2Q5VUJ6 765 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 TCERG1LQ5VWI1 586 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 GJB7Q6PEY0 223 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 LRRC31Q6UY01 552 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 TPH2Q8IWU9 490 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 HERC5Q9UII4 1024 aaKnown RBP22.3■■□□□ 1.16
SMIM3-201ENST00000526627 TMX2Q9Y320 296 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 PCDHB13Q9Y5F0 798 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 APBA3O96018 575 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 LRRC57Q8N9N7 239 aa22.3■■□□□ 1.16
SMIM3-201ENST00000526627 GTPBP10A4D1E9 387 aaKnown RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 NFIL3Q16649 462 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 ZC2HC1CQ53FD0 456 aaPredicted RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 FOXR1Q6PIV2 292 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 OLIG1Q8TAK6 271 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 GCNT4Q9P109 453 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 WRAP73Q9P2S5 460 aaPredicted RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 ZSCAN5CA6NGD5 496 aaPredicted RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 TCP10L2B9ZVM9 353 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 CHMP2AO43633 222 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 FAM13AO94988 1023 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 ZBTB48P10074 688 aaPredicted RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 CARSP49589 748 aaKnown RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 ALKBH5Q6P6C2 394 aaKnown RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 CCDC174Q6PII3 467 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 TEX2Q8IWB9 1127 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 RANBP17Q9H2T7 1088 aaKnown RBP22.29■■□□□ 1.16
SMIM3-201ENST00000526627 ARHGEF10LQ9HCE6 1279 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 TMEM59LQ9UK28 342 aa22.29■■□□□ 1.16
SMIM3-201ENST00000526627 GCOM1H8Y6P7 765 aaPredicted RBP22.28■■□□□ 1.16
SMIM3-201ENST00000526627 POLR2MP0CAP2 368 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 UBXN2AP68543 259 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 MYCT1Q8N699 235 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 GOLPH3Q9H4A6 298 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 CES2O00748 559 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 PRELPP51888 382 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 COG2Q14746 738 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 KSR1Q8IVT5 923 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 GOLGA6L1Q8N7Z2 621 aa22.28■■□□□ 1.16
SMIM3-201ENST00000526627 ATP8B3O60423 1300 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 DDX3XO00571 662 aaKnown RBP eCLIP22.27■■□□□ 1.166e-7■■■■■ 55.7
SMIM3-201ENST00000526627 HEXIM1O94992 359 aaKnown RBP22.27■■□□□ 1.16
SMIM3-201ENST00000526627 ANXA13P27216 316 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 ZNF131P52739 623 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 NNTQ13423 1086 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 IFT20Q8IY31 132 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 USP38Q8NB14 1042 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 CNKSR1Q969H4 720 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 ZFP91Q96JP5 570 aaPredicted RBP22.27■■□□□ 1.16
SMIM3-201ENST00000526627 KRT12Q99456 494 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 PARVGQ9HBI0 331 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 FRMPD4Q14CM0 1322 aa22.27■■□□□ 1.16
SMIM3-201ENST00000526627 KIF4AO95239 1232 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 RNASE9P60153 205 aaKnown RBP22.26■■□□□ 1.15
SMIM3-201ENST00000526627 FAM186BQ8IYM0 893 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 EPB41L5Q9HCM4 733 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 CWC15Q9P013 229 aaKnown RBP22.26■■□□□ 1.15
SMIM3-201ENST00000526627 ZBTB21Q9ULJ3 1066 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 ESYT3A0FGR9 886 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 CLRN2A0PK11 232 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 SPDYE2BA6NHP3 402 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 IVLP07476 585 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 VIL1P09327 827 aaKnown RBP22.26■■□□□ 1.15
SMIM3-201ENST00000526627 FAM153BP0C7A2 387 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 SPDYE6P0CI01 402 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 ARP10275 920 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 PSMC2P35998 433 aaKnown RBP22.26■■□□□ 1.15
SMIM3-201ENST00000526627 TRAF1Q13077 416 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 RPS6KA1Q15418 735 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 FAM153CQ494X1 144 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 B3GNT9Q6UX72 402 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 TPCN2Q8NHX9 752 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 UNC45AQ9H3U1 944 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 PLEKHA4Q9H4M7 779 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.26■■□□□ 1.15
SMIM3-201ENST00000526627 FAM153AQ9UHL3 310 aa22.26■■□□□ 1.15
SMIM3-201ENST00000526627 SHTN1A0MZ66 631 aa22.25■■□□□ 1.15
SMIM3-201ENST00000526627 GOLGA6CA6NDK9 693 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms