RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 MIB1Q86YT6 1006 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 CILP2Q8IUL8 1156 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 C1orf162Q8NEQ5 155 aaPredicted RBP6.22□□□□□ -1.41
USP47-206ENST00000525367 TTLL11Q8NHH1 800 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 TTC8Q8TAM2 541 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 ALG3Q92685 438 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 FUBP3Q96I24 572 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP47-206ENST00000525367 GBP4Q96PP9 640 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 ZNF700Q9H0M5 742 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 POFUT1Q9H488 388 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 PRDM12Q9H4Q4 367 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 SLC39A2Q9NP94 309 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 DTLQ9NZJ0 730 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 BTBD7Q9P203 1132 aa6.22□□□□□ -1.41
USP47-206ENST00000525367 PRAMEF22A3QJZ6 481 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 GOLGA8BA8MQT2 603 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 ELL2O00472 640 aaPredicted RBP6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA12O60330 932 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PPFIA4O75335 1185 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 CYP17A1P05093 508 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 CD40P25942 277 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 VIPR1P32241 457 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 GPR3P46089 330 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 NCKAP1LP55160 1127 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 DHX8Q14562 1220 aaKnown RBP6.21□□□□□ -1.42
USP47-206ENST00000525367 CR1LQ2VPA4 569 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 ZBTB41Q5SVQ8 909 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 GPR158Q5T848 1215 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PRAMEF18Q5VWM3 479 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 CD276Q5ZPR3 534 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 TEPPQ6URK8 271 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 KSR2Q6VAB6 950 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 LIPIQ6XZB0 460 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 ATG4DQ86TL0 474 aaPredicted RBP6.21□□□□□ -1.42
USP47-206ENST00000525367 ZSWIM9Q86XI8 627 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 TRIM48Q8IWZ4 208 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 FAM126BQ8IXS8 530 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 HIPK4Q8NE63 616 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PNISRQ8TF01 805 aaKnown RBP6.21□□□□□ -1.42
USP47-206ENST00000525367 LMBR1Q8WVP7 490 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 IL17RAQ96F46 866 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 LIN37Q96GY3 246 aaPredicted RBP6.21□□□□□ -1.42
USP47-206ENST00000525367 CAMKK2Q96RR4 588 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 MENTQ9BUN1 341 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 CDH19Q9H159 772 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 SLC6A17Q9H1V8 727 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 UCKL1Q9NWZ5 548 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 EDARQ9UNE0 448 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 SPEF1Q9Y4P9 236 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 NUB1Q9Y5A7 615 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA9Q9Y5G4 932 aaKnown RBP6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA8Q9Y5G5 932 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA7Q9Y5G6 932 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA6Q9Y5G7 932 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA3Q9Y5H0 932 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PCDHGA2Q9Y5H1 932 aa6.21□□□□□ -1.42
USP47-206ENST00000525367 PRPF3O43395 683 aaKnown RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 ZBTB7AO95365 584 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 MPIG6BO95866 241 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 ASGR2P07307 311 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 GLI1P08151 1106 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 FBLN1P23142 703 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 AOAHP28039 575 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 FNTBP49356 437 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 YBX1P67809 324 aaKnown RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 DBPQ10586 325 aaPredicted RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 MYBPC3Q14896 1274 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 MLC1Q15049 377 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 EPHA7Q15375 998 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 KCNMB1Q16558 191 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 GFOD2Q3B7J2 385 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 CT83Q5H943 113 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 NXNQ6DKJ4 435 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 PGM2L1Q6PCE3 622 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 LRSAM1Q6UWE0 723 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 TMC5Q6UXY8 1006 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 CXorf67Q86X51 503 aaPredicted RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 TCEAL8Q8IYN2 117 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 TOE1Q96GM8 510 aaKnown RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 FAXDC2Q96IV6 333 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 ANO3Q9BYT9 981 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 PDGFDQ9GZP0 370 aaPredicted RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 CCM2LQ9NUG4 571 aaPredicted RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 IP6K2Q9UHH9 426 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 NOB1Q9ULX3 412 aaKnown RBP6.2□□□□□ -1.42
USP47-206ENST00000525367 PPP2R3BQ9Y5P8 575 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 WASHC2AQ641Q2 1341 aa6.2□□□□□ -1.42
USP47-206ENST00000525367 UBA6A0AVT1 1052 aaPredicted RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 ZNF503-AS2A6NEH8 195 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 IFRD1O00458 451 aaPredicted RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 APOL3O95236 402 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 C8BP07358 591 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 U2AF1L5P0DN76 240 aaPredicted RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 RBM10P98175 930 aaKnown RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 U2AF1Q01081 240 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP47-206ENST00000525367 SLC9A5Q14940 896 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 FAM102BQ5T8I3 360 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms