RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 TMEM60Q9H2L4 133 aa12.17□□□□□ -0.46
AP001001.2-201ENST00000524966 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
AP001001.2-201ENST00000524966 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
AP001001.2-201ENST00000524966 CDH23Q9H251 3354 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 COL6A3P12111 3177 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 LOXHD1Q8IVV2 1947 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 ABHD14A-ACY1A0A1B0GW23 586 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 ZBBXA8MT70 800 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 MARCH6O60337 910 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 NEMFO60524 1076 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 BAIAP3O94812 1187 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 OATP04181 439 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 P4HBP07237 508 aaKnown RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 ATP2A2P16615 1042 aaKnown RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 PBX2P40425 430 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 TOB1P50616 345 aaPredicted RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 PSMC5P62195 406 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 MRPS6P82932 125 aaKnown RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 IKBKEQ14164 716 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 EPHA7Q15375 998 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 ZNF174Q15697 407 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 CALCRLQ16602 461 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 XKR3Q5GH77 459 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 IER5Q5VY09 327 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 C4orf32Q8N8J7 132 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 PBX4Q9BYU1 374 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 SEMA6BQ9H3T3 888 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 TTC12Q9H892 705 aaPredicted RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 MTMR10Q9NXD2 777 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 CDY2AQ9Y6F7 541 aa12.16□□□□□ -0.46
AP001001.2-201ENST00000524966 MAGEB2O15479 319 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 DNAJB2P25686 324 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 MCM7P33993 719 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 TXKP42681 527 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 TRAPPC10P48553 1259 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 WDR5P61964 334 aaKnown RBP12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 LPIN1Q14693 890 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 FBXO47Q5MNV8 452 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 ANO5Q75V66 913 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 LINC01465Q8N7H1 131 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 SEPT8Q92599 483 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 CELF4Q9BZC1 486 aaKnown RBP12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 AGO3Q9H9G7 860 aaKnown RBP12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 WRAP73Q9P2S5 460 aaPredicted RBP12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 CEP131Q9UPN4 1083 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 SQORQ9Y6N5 450 aa12.15□□□□□ -0.46
AP001001.2-201ENST00000524966 KDM3AQ9Y4C1 1321 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 TMEM150BA6NC51 233 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 EFCAB14O75071 495 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 SLITRK3O94933 977 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 GHRP10912 638 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 RABGGTBP53611 331 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 ORC2Q13416 577 aaPredicted RBP12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 GNL2Q13823 731 aaKnown RBP12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 TTC38Q5R3I4 469 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 EFCAB12Q6NXP0 572 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 TIFAQ96CG3 184 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 SLC9A7Q96T83 725 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 SH2D3AQ9BRG2 576 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 PCDHA11Q9Y5I1 949 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 TTC3P53804 2025 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 MICAL3Q7RTP6 2002 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 TRANK1O15050 2925 aa12.14□□□□□ -0.47
AP001001.2-201ENST00000524966 GBF1Q92538 1859 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 IGKV6-21A0A0C4DH24 114 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 ZBTB39O15060 712 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 GPR32O75388 356 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 MYOGP15173 224 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 DEFB103AP81534 67 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 NBR1Q14596 966 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 RAB30Q15771 203 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 TMCO2Q7Z6W1 182 aaPredicted RBP12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 HERC6Q8IVU3 1022 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 METTL13Q8N6R0 699 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 USP38Q8NB14 1042 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 SNX21Q969T3 373 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 DYDC2Q96IM9 177 aa12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 IFIH1Q9BYX4 1025 aaKnown RBP12.13□□□□□ -0.47
AP001001.2-201ENST00000524966 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms