RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 LMCD1Q9NZU5 365 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 AFG3L2Q9Y4W6 797 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 CORINQ9Y5Q5 1042 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 EP300Q09472 2414 aaPredicted RBP8.82□□□□□ -1
NEDD8-203ENST00000524927 ZNF536O15090 1300 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 GBF1Q92538 1859 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 CEP250Q9BV73 2442 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 H0Y858 1186 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 IL1R1P14778 569 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 PLCG1P19174 1290 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 GIPRP48546 466 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 AIMP1Q12904 312 aaKnown RBP8.81□□□□□ -1
NEDD8-203ENST00000524927 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 MCTP2Q6DN12 878 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 CYFIP1Q7L576 1253 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 TMEM199Q8N511 208 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 OR6P1Q8NGX9 317 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 TMPRSS13Q9BYE2 586 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 TRIM55Q9BYV6 548 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 TLR9Q9NR96 1032 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 AP4E1Q9UPM8 1137 aa8.81□□□□□ -1
NEDD8-203ENST00000524927 OAS3Q9Y6K5 1087 aaKnown RBP8.81□□□□□ -1
NEDD8-203ENST00000524927 ZFYVE26Q68DK2 2539 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 U2SURPO15042 1029 aaKnown RBP8.8□□□□□ -1
NEDD8-203ENST00000524927 SMAD7O15105 426 aaKnown RBP8.8□□□□□ -1
NEDD8-203ENST00000524927 PDE8AO60658 829 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 PQBP1O60828 265 aaKnown RBP8.8□□□□□ -1
NEDD8-203ENST00000524927 ATE1O95260 518 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 HTR3BO95264 441 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 KCNA5P22460 613 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 MAPK4P31152 587 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 ETF1P62495 437 aaKnown RBP8.8□□□□□ -1
NEDD8-203ENST00000524927 PABPC4Q13310 644 aaKnown RBP eCLIP8.8□□□□□ -11e-8■□□□□ 9.8
NEDD8-203ENST00000524927 TNNI3KQ59H18 835 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 PPM1JQ5JR12 505 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 KIAA1211Q6ZU35 1233 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 ANKRD33Q7Z3H0 272 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 ARMC10Q8N2F6 343 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 C12orf50Q8NA57 414 aaPredicted RBP8.8□□□□□ -1
NEDD8-203ENST00000524927 FERMT2Q96AC1 680 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 ANKRD2Q9GZV1 360 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 ZSWIM4Q9H7M6 989 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 DLL3Q9NYJ7 618 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 TMOD2Q9NZR1 351 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 PPP1R9AQ9ULJ8 1098 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 FAM50BQ9Y247 325 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 SPTBN2O15020 2390 aa8.8□□□□□ -1
NEDD8-203ENST00000524927 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
NEDD8-203ENST00000524927 MEGF11A6BM72 1044 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 ANXA1P04083 346 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 PGRP06401 933 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 MYOGP15173 224 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 CSF2RAP15509 400 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 RABGGTBP53611 331 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 CACNB3P54284 484 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 DCTN1Q14203 1278 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
NEDD8-203ENST00000524927 TREML2Q5T2D2 321 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 C15orf52Q6ZUT6 534 aaKnown RBP8.79□□□□□ -1
NEDD8-203ENST00000524927 ADHFE1Q8IWW8 467 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 SCYL3Q8IZE3 742 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 PLBD2Q8NHP8 589 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 HNRNPLLQ8WVV9 542 aaKnown RBP8.79□□□□□ -1
NEDD8-203ENST00000524927 OSBPL2Q9H1P3 480 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 REV1Q9UBZ9 1251 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 MUTYHQ9UIF7 546 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 TBX21Q9UL17 535 aa8.79□□□□□ -1
NEDD8-203ENST00000524927 PTPRFP10586 1907 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 EPOPA6NHQ4 379 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 TMPRSS2O15393 492 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 PAX4O43316 350 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 FGBP02675 491 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 ACRP10323 421 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 GLB1P16278 677 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 AVPR2P30518 371 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 TXKP42681 527 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 ERVK-24P63145 666 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 GRB10Q13322 594 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 LRRC41Q15345 812 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 PPP2R5EQ16537 467 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 FDX2Q6P4F2 183 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 DYMQ7RTS9 669 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.78□□□□□ -1
NEDD8-203ENST00000524927 IL23AQ9NPF7 189 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 RAXQ9Y2V3 346 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 PCDHGC5Q9Y5F6 944 aa8.78□□□□□ -1
NEDD8-203ENST00000524927 DRD2P14416 443 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 EIF2S2P20042 333 aaKnown RBP8.77□□□□□ -1.01
NEDD8-203ENST00000524927 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 KCNJ4P48050 445 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 VCPP55072 806 aaKnown RBP8.77□□□□□ -1.01
NEDD8-203ENST00000524927 TMEM67Q5HYA8 995 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 ZNF804AQ7Z570 1209 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 GPR142Q7Z601 462 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 LSRQ86X29 649 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-203ENST00000524927 FAM169BQ8N8A8 192 aa8.77□□□□□ -1.01
NEDD8-203ENST00000524927 RBBP8NLQ8NC74 664 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-203ENST00000524927 SMG8Q8ND04 991 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms