RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SRRDQ9UH36 339 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 TCAF1Q9Y4C2 921 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 MROH1Q8NDA8 1641 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 PLEKHH2Q8IVE3 1493 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 MLH3Q9UHC1 1453 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 SHANK2Q9UPX8 1470 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.4□□□□□ -1.7
CSDE1-208ENST00000524652 REREQ9P2R6 1566 aa4.4□□□□□ -1.7
CSDE1-208ENST00000524652 FER1L4A9Z1Z3 1794 aa4.4□□□□□ -1.7
CSDE1-208ENST00000524652 C9orf84Q5VXU9 1444 aa4.4□□□□□ -1.7
CSDE1-208ENST00000524652 DEPDC5O75140 1603 aa4.4□□□□□ -1.7
CSDE1-208ENST00000524652 BLACEA4D250 179 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 H0Y858 1186 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 ACOT7O00154 380 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 U2SURPO15042 1029 aaKnown RBP4.4□□□□□ -1.71
CSDE1-208ENST00000524652 STK10O94804 968 aaKnown RBP4.4□□□□□ -1.71
CSDE1-208ENST00000524652 C6P13671 934 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 TACR2P21452 398 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 CSF2RBP32927 897 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 GLRBP48167 497 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 PAK1Q13153 545 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 RASGRF1Q13972 1273 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 R3HDM1Q15032 1099 aaKnown RBP4.4□□□□□ -1.71
CSDE1-208ENST00000524652 NBPF6Q5VWK0 638 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 PTPRN2Q92932 1015 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 NBPF4Q96M43 638 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 PTPN18Q99952 460 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 SRPK3Q9UPE1 567 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 ADGRL2O95490 1459 aa4.4□□□□□ -1.71
CSDE1-208ENST00000524652 EIF2AK4Q9P2K8 1649 aaKnown RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 ADAMTSL3P82987 1691 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 TCRBV5S4A2TA0A5A2 114 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 MUSKO15146 869 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 PDPK1O15530 556 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 ADCY3O60266 1144 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 CUTAO60888 179 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 ZNF623O75123 536 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 IL18BPO95998 194 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 PTPN1P18031 435 aaKnown RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 NAT1P18440 290 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 DBPQ10586 325 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 FAM50AQ14320 339 aaKnown RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 GPR19Q15760 415 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 ZNF568Q3ZCX4 644 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 FIGNQ5HY92 759 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 ZNF585AQ6P3V2 769 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 CRIP3Q6Q6R5 217 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 SPATC1Q76KD6 591 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 SPRED1Q7Z699 444 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 MTDHQ86UE4 582 aaKnown RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 SCUBE1Q8IWY4 988 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 SH3RF2Q8TEC5 729 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 WWC2-AS2Q96NR7 200 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 TACO1Q9BSH4 297 aaKnown RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 CD244Q9BZW8 370 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 TESMINQ9Y4I5 508 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 TRAF6Q9Y4K3 522 aa4.39□□□□□ -1.71
CSDE1-208ENST00000524652 RNF17Q9BXT8 1623 aaKnown RBP4.39□□□□□ -1.71
CSDE1-208ENST00000524652 CLTCQ00610 1675 aaKnown RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 RTEL1-TNFRSF6BF6WH68 1400 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 NCOA1Q15788 1441 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 MAGI2Q86UL8 1455 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 POLD1P28340 1107 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 GJA4P35212 333 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 ZC3H6P61129 1189 aaKnown RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 SUMO1P63165 101 aaKnown RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 USP10Q14694 798 aaKnown RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 MTERF2Q49AM1 385 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 DPP8Q6V1X1 898 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 GPR155Q7Z3F1 870 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 PALM2Q8IXS6 379 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 ZBTB38Q8NAP3 1195 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 SLC16A11Q8NCK7 471 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 Q8TCH9 128 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 IPO9Q96P70 1041 aaKnown RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 LMF1Q96S06 567 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 CDC6Q99741 560 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 CARD11Q9BXL7 1154 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 CCDC113Q9H0I3 377 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 UNC13BO14795 1591 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 MADDQ8WXG6 1647 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 C3P01024 1663 aa4.38□□□□□ -1.71
CSDE1-208ENST00000524652 RIMS1Q86UR5 1692 aaKnown RBP4.38□□□□□ -1.71
CSDE1-208ENST00000524652 ATP10AO60312 1499 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 A2MP01023 1474 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 DUOX2Q9NRD8 1548 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 TRBV23-1A0A0A0MS06 115 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 ARVCFO00192 962 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 CYR61O00622 381 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 GSTA4O15217 222 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 C6orf222P0C671 652 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-208ENST00000524652 GDF5P43026 501 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 RBM25P49756 843 aaKnown RBP4.37□□□□□ -1.71
CSDE1-208ENST00000524652 GABREP78334 506 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 SSRP1Q08945 709 aaKnown RBP4.37□□□□□ -1.71
CSDE1-208ENST00000524652 TOP3AQ13472 1001 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-208ENST00000524652 LONRF2Q1L5Z9 754 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 HS1BP3Q53T59 392 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 ZMAT1Q5H9K5 638 aa4.37□□□□□ -1.71
CSDE1-208ENST00000524652 BTBD8Q5XKL5 378 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms