RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 FAM26DQ5JW98 314 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 Q6ZUG5 572 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 NIPA1Q7RTP0 329 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 BRF1Q92994 677 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 PGBD1Q96JS3 809 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 SAMD11Q96NU1 681 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 UHRF1Q96T88 793 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 C6orf50Q9HD87 102 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 TCEAL9Q9UHQ7 104 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 COG5Q9UP83 839 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 MICAL3Q7RTP6 2002 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 KAT6AQ92794 2004 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 PTPRSQ13332 1948 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 NCOR1O75376 2440 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 ESYT2A0FGR8 921 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 MBLAC1A4D2B0 266 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 BACH1O14867 736 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 UPP2O95045 317 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 NEFLP07196 543 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 GHRP10912 638 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 CPA1P15085 419 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 RPS6KB1P23443 525 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 GNA11P29992 359 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 ADD1P35611 737 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 CLK2P49760 499 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 SLC26A2P50443 739 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 ACTR2P61160 394 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 IGBP1P78318 339 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 HTRA4P83105 476 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 SETQ01105 290 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 AMHR2Q16671 573 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 PTPROQ16827 1216 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 IER5Q5VY09 327 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 FAM160B1Q5W0V3 765 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 KRT40Q6A162 431 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 BLOC1S3Q6QNY0 202 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 RUFY4Q6ZNE9 571 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 PLPPR4Q7Z2D5 763 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 REXO1Q8N1G1 1221 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 KCNB2Q92953 911 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 HLA-CQ95604 372 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 TOP1MTQ969P6 601 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 SUGCTQ9HAC7 445 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 AGO4Q9HCK5 861 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 FAM217BQ9NTX9 383 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 SNX14Q9Y5W7 946 aa9.67□□□□□ -0.86
CTNNA1-242ENST00000524292 NID2Q14112 1375 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 MEIS1O00470 390 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 LPXNO60711 386 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 CHRNA1P02708 482 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 ARP10275 920 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 INSRRP14616 1297 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 GCGRP47871 477 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 STAT5BP51692 787 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 MRPS6P82932 125 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 TFF2Q03403 129 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 JAKMIP3Q5VZ66 844 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 PLA2G4DQ86XP0 818 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 FBXL16Q8N461 479 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 CCDC148Q8NFR7 591 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 CYP2W1Q8TAV3 490 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 DNAJB3Q8WWF6 145 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 ZMYND12Q9H0C1 365 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 TMEM260Q9NX78 707 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 CDY2AQ9Y6F7 541 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 XIRP2A4UGR9 3374 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 COL4A4P53420 1690 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 MUC3AQ02505 3323 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 REV3LO60673 3130 aa9.66□□□□□ -0.86
CTNNA1-242ENST00000524292 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 DDX39AO00148 427 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 IPO5O00410 1097 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 PRPF3O43395 683 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 EPB41L2O43491 1005 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 CYP3A4P08684 503 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 CD46P15529 392 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 MGAT3Q09327 533 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 ITGB3BPQ13352 177 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 LPIN1Q14693 890 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 PLCB4Q15147 1175 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 FBXO47Q5MNV8 452 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 MARCH8Q5T0T0 291 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 IL17RAQ96F46 866 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 PCYT2Q99447 389 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 C17orf80Q9BSJ5 609 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 RNF26Q9BY78 433 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 RWDD3Q9Y3V2 267 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 SIP14410 1827 aa9.65□□□□□ -0.86
CTNNA1-242ENST00000524292 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms