RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PTPN21Q16825 1174 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 SKIDA1Q1XH10 827 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 FOXB1Q99853 325 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 ANO3Q9BYT9 981 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 VTA1Q9NP79 307 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.22□□□□□ -1.57
SKP1-212ENST00000523966 BTBD7Q9P203 1132 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 CROTQ9UKG9 612 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 SYNPO2Q9UMS6 1093 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 IRAK3Q9Y616 596 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 E2F8A0AVK6 867 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 K7ESF4 209 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 NFIBO00712 420 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 MT-CO1P00395 513 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 APEX1P27695 318 aaKnown RBP5.21□□□□□ -1.58
SKP1-212ENST00000523966 MC4RP32245 332 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 BCAR1P56945 870 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 MAP3K12Q12852 859 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 UGT8Q16880 541 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 ABCB5Q2M3G0 1257 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 LIPIQ6XZB0 460 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 RTN4RL1Q86UN2 441 aaPredicted RBP5.21□□□□□ -1.58
SKP1-212ENST00000523966 STK32CQ86UX6 486 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 CXorf67Q86X51 503 aaPredicted RBP5.21□□□□□ -1.58
SKP1-212ENST00000523966 KYQ8NBH2 561 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 ZBTB8AQ96BR9 441 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 CHMP4CQ96CF2 233 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 ZNF496Q96IT1 587 aaPredicted RBP5.21□□□□□ -1.58
SKP1-212ENST00000523966 CCDC136Q96JN2 1154 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 PPP1R16BQ96T49 567 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 MYL10Q9BUA6 226 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 BTBD2Q9BX70 525 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 TRIM8Q9BZR9 551 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 WNT8AQ9H1J5 351 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 POFUT1Q9H488 388 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 KCNK12Q9HB15 430 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 KLHL42Q9P2K6 505 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 PLA2G2DQ9UNK4 145 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 PMF1-BGLAPU3KQ54 211 aa5.21□□□□□ -1.58
SKP1-212ENST00000523966 TCAF2A6NFQ2 919 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 GABRDO14764 452 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 MARCH6O60337 910 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 FARP2O94887 1054 aaPredicted RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 PRLP01236 227 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 MTHFD2P13995 350 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 XPAP23025 273 aaPredicted RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 FBLN1P23142 703 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 EPHB3P54753 998 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 ERVK-21P61565 698 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 NFATC3Q12968 1075 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 ACAP2Q15057 778 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 WDR72Q3MJ13 1102 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 KIAA1841Q6NSI8 718 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 CCDC62Q6P9F0 684 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 SYDE1Q6ZW31 735 aaPredicted RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 IGDCC3Q8IVU1 814 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 DTX3Q8N9I9 347 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 FOXRED1Q96CU9 486 aaPredicted RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 FUBP3Q96I24 572 aaKnown RBP eCLIP5.2□□□□□ -1.58
SKP1-212ENST00000523966 RAX2Q96IS3 184 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 FAXDC2Q96IV6 333 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 FAM84AQ96KN4 292 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 SIGLEC10Q96LC7 697 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 TACO1Q9BSH4 297 aaKnown RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 C11orf84Q9BUA3 381 aaPredicted RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 OR10A5Q9H207 317 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 MS4A5Q9H3V2 200 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 DNAJC28Q9NX36 388 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 RBPJLQ9UBG7 517 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 ZFP69BQ9UJL9 534 aa5.2□□□□□ -1.58
SKP1-212ENST00000523966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.2□□□□□ -1.58
SKP1-212ENST00000523966 LCHNA4D1U4 455 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 RFXAPO00287 272 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 XPOTO43592 962 aaKnown RBP5.19□□□□□ -1.58
SKP1-212ENST00000523966 CLEC2LP0C7M8 214 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 ENPP1P22413 925 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 IARSP41252 1262 aaKnown RBP5.19□□□□□ -1.58
SKP1-212ENST00000523966 LIMS1P48059 325 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 RGS3P49796 1198 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 ITGA1P56199 1179 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 PDCD1Q15116 288 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 FSCN1Q16658 493 aaKnown RBP5.19□□□□□ -1.58
SKP1-212ENST00000523966 CT83Q5H943 113 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 CXXC5Q7LFL8 322 aaKnown RBP5.19□□□□□ -1.58
SKP1-212ENST00000523966 OTOP2Q7RTS6 562 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 PROSER1Q86XN7 944 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 STPG3Q8N7X2 389 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 C1orf162Q8NEQ5 155 aaPredicted RBP5.19□□□□□ -1.58
SKP1-212ENST00000523966 TGFBRAP1Q8WUH2 860 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 LMBR1Q8WVP7 490 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 RSAD2Q8WXG1 361 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 ZSWIM3Q96MP5 696 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 GORASP1Q9BQQ3 440 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 ZBTB21Q9ULJ3 1066 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 CNOT6Q9ULM6 557 aaKnown RBP5.19□□□□□ -1.58
SKP1-212ENST00000523966 EID1Q9Y6B2 187 aa5.19□□□□□ -1.58
SKP1-212ENST00000523966 PRSS38A1L453 326 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 KLHL33A6NCF5 533 aa5.18□□□□□ -1.58
SKP1-212ENST00000523966 ETV2O00321 342 aaPredicted RBP5.18□□□□□ -1.58
SKP1-212ENST00000523966 GLDCP23378 1020 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms