RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
PVT1-215ENST00000522963 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 AFAP1L1Q8TED9 768 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 GDF15Q99988 308 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 LXNQ9BS40 222 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 AZI2Q9H6S1 392 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 ZNF302Q9NR11 478 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 KCNH3Q9ULD8 1083 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
PVT1-215ENST00000522963 TCHHQ07283 1943 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 UMODL1Q5DID0 1318 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 EMSYQ7Z589 1322 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 IGSF9BQ9UPX0 1349 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 MYH9P35579 1960 aaKnown RBP13.33□□□□□ -0.28
PVT1-215ENST00000522963 A0A087WWV3 80 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 HAS3O00219 553 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 STBD1O95210 358 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 SMIM10L2AP0DMW4 78 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 SMIM10L2BP0DMW5 78 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 LIG1P18858 919 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 PLCG1P19174 1290 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 ATP4AP20648 1035 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 STAT5BP51692 787 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 FPGSQ05932 587 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
PVT1-215ENST00000522963 FAM160B1Q5W0V3 765 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 PDXDC2PQ6P474 469 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 PLPPR4Q7Z2D5 763 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
PVT1-215ENST00000522963 KCNK18Q7Z418 384 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 C4orf19Q8IY42 314 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 PDILTQ8N807 584 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 ATP6V0A1Q93050 837 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 ZSWIM4Q9H7M6 989 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
PVT1-215ENST00000522963 CCDC39Q9UFE4 941 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 KIAA1024Q9UPX6 916 aa13.33□□□□□ -0.28
PVT1-215ENST00000522963 C17orf102A2RUQ5 167 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 ZBTB39O15060 712 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 POLR2DO15514 142 aaKnown RBP13.32□□□□□ -0.28
PVT1-215ENST00000522963 LYPLA2O95372 231 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 MUTP22033 750 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 SYKP43405 635 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 PRKCEQ02156 737 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 E2F4Q16254 413 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 RRAGBQ5VZM2 374 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 TMEM199Q8N511 208 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 ENGASEQ8NFI3 743 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 SCLYQ96I15 445 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 CDK5RAP3Q96JB5 506 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
PVT1-215ENST00000522963 NT5C3AQ9H0P0 336 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 SMARCAD1Q9H4L7 1026 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 SETD4Q9NVD3 440 aa13.32□□□□□ -0.28
PVT1-215ENST00000522963 TMEM150BA6NC51 233 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 E9PMD0 336 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 DKC1O60832 514 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■■■■■ 28.2
PVT1-215ENST00000522963 NR1I2O75469 434 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 ACRP10323 421 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 CSF2RAP15509 400 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 IGBP1P78318 339 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 FAM160A1Q05DH4 1040 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
PVT1-215ENST00000522963 HIC1Q14526 733 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 PLCB4Q15147 1175 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
PVT1-215ENST00000522963 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 CKAP2LQ8IYA6 745 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
PVT1-215ENST00000522963 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 PIGOQ8TEQ8 1089 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 DHX58Q96C10 678 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 BLOC1S4Q9NUP1 217 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
PVT1-215ENST00000522963 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
PVT1-215ENST00000522963 ZNF202O95125 648 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 OATP04181 439 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 YWHABP31946 246 aaKnown RBP13.3□□□□□ -0.28
PVT1-215ENST00000522963 BMP8BP34820 402 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 STAT6P42226 847 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 SLC26A2P50443 739 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 PPIGQ13427 754 aaKnown RBP eCLIP13.3□□□□□ -0.287e-7■■□□□ 13.8
PVT1-215ENST00000522963 BFSP2Q13515 415 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 ANO5Q75V66 913 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms